RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 UBA7P41226 1012 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 ALDH7A1P49419 539 aaKnown RBP18.15■□□□□ 0.5
CGREF1-205ENST00000404694 ERVFC1P60507 584 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 RNASELQ05823 741 aaKnown RBP18.15■□□□□ 0.5
CGREF1-205ENST00000404694 MAPK7Q13164 816 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 MAPK6Q16659 721 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 CTC1Q2NKJ3 1217 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 TPRNQ4KMQ1 711 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 ADAMTS19Q8TE59 1207 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 PPP2R3CQ969Q6 453 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 RNF39Q9H2S5 420 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 UBN1Q9NPG3 1134 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 CLDND1Q9NY35 253 aa18.15■□□□□ 0.5
CGREF1-205ENST00000404694 HOOK1Q9UJC3 728 aaKnown RBP18.15■□□□□ 0.5
CGREF1-205ENST00000404694 NCK2O43639 380 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 B4GALT3O60512 393 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 NPTXRO95502 500 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 EDN1P05305 212 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 SSBP05455 408 aaKnown RBP eCLIP18.14■□□□□ 0.49
CGREF1-205ENST00000404694 GUCY2CP25092 1073 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 EFNA5P52803 228 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 SLC12A3P55017 1021 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 KRT17Q04695 432 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 PRPF4BQ13523 1007 aaKnown RBP18.14■□□□□ 0.49
CGREF1-205ENST00000404694 ZSCAN23Q3MJ62 389 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 LEXMQ3ZCV2 418 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 EP400NLQ6ZTU2 488 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 ZNF280BQ86YH2 543 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 SYT2Q8N9I0 419 aaPredicted RBP18.14■□□□□ 0.49
CGREF1-205ENST00000404694 CALML4Q96GE6 196 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 DRC1Q96MC2 740 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 APOL6Q9BWW8 343 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 GBP3Q9H0R5 595 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 TNMDQ9H2S6 317 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 PDZD7Q9H5P4 517 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 DNAJB4Q9UDY4 337 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 CCDC39Q9UFE4 941 aa18.14■□□□□ 0.49
CGREF1-205ENST00000404694 PUF60Q9UHX1 559 aaKnown RBP18.14■□□□□ 0.49
CGREF1-205ENST00000404694 ARL5CA6NH57 179 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 ACKR2O00590 384 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 FSCN2O14926 492 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 INPPL1O15357 1258 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 DDHD2O94830 711 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 POMCP01189 267 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 PLA2G4BP0C869 781 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 LTBRP36941 435 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 MLH1P40692 756 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 NPTX2P47972 431 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 PEX3P56589 373 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 ZNF445P59923 1031 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 PDE12Q6L8Q7 609 aaKnown RBP18.13■□□□□ 0.49
CGREF1-205ENST00000404694 RBM43Q6ZSC3 357 aaKnown RBP18.13■□□□□ 0.49
CGREF1-205ENST00000404694 TMEM173Q86WV6 379 aaPredicted RBP18.13■□□□□ 0.49
CGREF1-205ENST00000404694 HACE1Q8IYU2 909 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 IQUBQ8NA54 791 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 MICAL1Q8TDZ2 1067 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 LRRC15Q8TF66 581 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 TMEM169Q96HH4 297 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 EPSTI1Q96J88 318 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 TCF25Q9BQ70 676 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 TIPINQ9BVW5 301 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 CUEDC2Q9H467 287 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 IGFLR1Q9H665 355 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 KANSL3Q9P2N6 904 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 USP20Q9Y2K6 914 aa18.13■□□□□ 0.49
CGREF1-205ENST00000404694 C5orf42Q9H799 3197 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 PHLPP2Q6ZVD8 1323 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 CARNS1A5YM72 827 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 CCDC169A6NNP5 214 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 H3BQ06 376 aaPredicted RBP18.12■□□□□ 0.49
CGREF1-205ENST00000404694 N4BP3O15049 544 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 LINC01565O15544 149 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 TBX10O75333 385 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 GALTP07902 379 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 NRIP1P48552 1158 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 SLC11A1P49279 550 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 RAD51AP2Q09MP3 1159 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 DMP1Q13316 513 aaPredicted RBP18.12■□□□□ 0.49
CGREF1-205ENST00000404694 TMEM132AQ24JP5 1023 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 SPECC1Q5M775 1068 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 PLPP4Q5VZY2 271 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
CGREF1-205ENST00000404694 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.12■□□□□ 0.49
CGREF1-205ENST00000404694 ZFP42Q96MM3 310 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 UHRF1Q96T88 793 aaPredicted RBP18.12■□□□□ 0.49
CGREF1-205ENST00000404694 GAD1Q99259 594 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 C17orf75Q9HAS0 396 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 ENTPD7Q9NQZ7 604 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 KCND2Q9NZV8 630 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 ARHGAP28Q9P2N2 729 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 GIT1Q9Y2X7 761 aa18.12■□□□□ 0.49
CGREF1-205ENST00000404694 SFI1A8K8P3 1242 aa18.11■□□□□ 0.49
CGREF1-205ENST00000404694 POLR2DO15514 142 aaKnown RBP18.11■□□□□ 0.49
CGREF1-205ENST00000404694 PLCG1P19174 1290 aa18.11■□□□□ 0.49
CGREF1-205ENST00000404694 AKAP5P24588 427 aa18.11■□□□□ 0.49
CGREF1-205ENST00000404694 SCNN1GP51170 649 aa18.11■□□□□ 0.49
CGREF1-205ENST00000404694 DLX2Q07687 328 aaPredicted RBP18.11■□□□□ 0.49
CGREF1-205ENST00000404694 KARSQ15046 597 aaKnown RBP18.11■□□□□ 0.49
CGREF1-205ENST00000404694 KRBA2Q6ZNG9 492 aa18.11■□□□□ 0.49
CGREF1-205ENST00000404694 EFHBQ8N7U6 833 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms