RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 C1QTNF9P0C862 333 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 SFPQP23246 707 aaKnown RBP eCLIP10.45□□□□□ -0.74
NUP43-204ENST00000403890 DSG1Q02413 1049 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 ZNF746Q6NUN9 644 aaPredicted RBP10.45□□□□□ -0.74
NUP43-204ENST00000403890 LILRA6Q6PI73 481 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 LRSAM1Q6UWE0 723 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 UNQ6494/PRO21346Q6UXR6 183 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 AGMOQ6ZNB7 445 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
NUP43-204ENST00000403890 SMAP1Q8IYB5 467 aaPredicted RBP10.45□□□□□ -0.74
NUP43-204ENST00000403890 ZNF654Q8IZM8 581 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 IGDCC4Q8TDY8 1250 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 KXD1Q9BQD3 176 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 IER2Q9BTL4 223 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 PHF20Q9BVI0 1012 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 INO80BQ9C086 356 aaPredicted RBP10.45□□□□□ -0.74
NUP43-204ENST00000403890 CHRDQ9H2X0 955 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 NRBP2Q9NSY0 501 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 GABBR1Q9UBS5 961 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 PCDHB2Q9Y5E7 798 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 PCDHA10Q9Y5I2 948 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 MYH15Q9Y2K3 1946 aa10.45□□□□□ -0.74
NUP43-204ENST00000403890 SPEGQ15772 3267 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 hCG_1642624A0A1W2PR95 340 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 PLEKHA8P1O95397 391 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 EFEMP2O95967 443 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 POMCP01189 267 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 CNR2P34972 360 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 CCR3P51677 355 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 AFF1P51825 1210 aaKnown RBP10.44□□□□□ -0.74
NUP43-204ENST00000403890 PRSS12P56730 875 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 AASDHQ4L235 1098 aaPredicted RBP10.44□□□□□ -0.74
NUP43-204ENST00000403890 HEATR3Q7Z4Q2 680 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.44□□□□□ -0.74
NUP43-204ENST00000403890 PLA2G4DQ86XP0 818 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 TEX2Q8IWB9 1127 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 RNF168Q8IYW5 571 aaPredicted RBP10.44□□□□□ -0.74
NUP43-204ENST00000403890 CMTR1Q8N1G2 835 aaKnown RBP10.44□□□□□ -0.74
NUP43-204ENST00000403890 MAP4K1Q92918 833 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 PGBD1Q96JS3 809 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 RSAD1Q9HA92 442 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 HEBP1Q9NRV9 189 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.44□□□□□ -0.74
NUP43-204ENST00000403890 CHST7Q9NS84 486 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 TBC1D22BQ9NU19 505 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 MARCH5Q9NX47 278 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 FNIP2Q9P278 1114 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 TCEAL9Q9UHQ7 104 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 PRG3Q9Y2Y8 225 aaPredicted RBP10.44□□□□□ -0.74
NUP43-204ENST00000403890 DOCK6Q96HP0 2047 aa10.44□□□□□ -0.74
NUP43-204ENST00000403890 MYH9P35579 1960 aaKnown RBP10.44□□□□□ -0.74
NUP43-204ENST00000403890 CNTNAP2Q9UHC6 1331 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 A0A087WZ62 844 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 MAN2B1O00754 1011 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 HNRNPA1P09651 372 aaKnown RBP eCLIP10.43□□□□□ -0.74
NUP43-204ENST00000403890 SREBF1P36956 1147 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 OR1G1P47890 313 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 DNM2P50570 870 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 NTHL1P78549 312 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
NUP43-204ENST00000403890 CATSPER4Q7RTX7 472 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 MRPL10Q7Z7H8 261 aaKnown RBP10.43□□□□□ -0.74
NUP43-204ENST00000403890 GLYCTKQ8IVS8 523 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 COLGALT2Q8IYK4 626 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 GPR65Q8IYL9 337 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 C12orf50Q8NA57 414 aaPredicted RBP10.43□□□□□ -0.74
NUP43-204ENST00000403890 NCOA7Q8NI08 942 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 ITFG1Q8TB96 612 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 FDXACB1Q9BRP7 624 aaPredicted RBP10.43□□□□□ -0.74
NUP43-204ENST00000403890 ZNF577Q9BSK1 485 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 ANO3Q9BYT9 981 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 IL21Q9HBE4 155 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 RIC8AQ9NPQ8 531 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 NDRG2Q9UN36 371 aaKnown RBP10.43□□□□□ -0.74
NUP43-204ENST00000403890 SAMM50Q9Y512 469 aa10.43□□□□□ -0.74
NUP43-204ENST00000403890 MTCL1Q9Y4B5 1905 aaKnown RBP10.43□□□□□ -0.74
NUP43-204ENST00000403890 TMEM8BA6NDV4 472 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 SHISA7A6NL88 538 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 FAM86B1E9PN63 330 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 ZNF862O60290 1169 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 NR1I2O75469 434 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 ECI2O75521 394 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 KCNK5O95279 499 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 OATP04181 439 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 FAM86B2P0C5J1 330 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 CXCL12P48061 93 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 CREMQ03060 361 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 DRP2Q13474 957 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 USP41Q3LFD5 358 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 ZNF410Q86VK4 478 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 CCDC82Q8N4S0 544 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 MBOAT7Q96N66 472 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 COLEC11Q9BWP8 271 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 LSM14BQ9BX40 385 aaKnown RBP10.42□□□□□ -0.74
NUP43-204ENST00000403890 LMAN1LQ9HAT1 526 aa10.42□□□□□ -0.74
NUP43-204ENST00000403890 IGLV3-22A0A075B6J6 115 aa10.41□□□□□ -0.74
NUP43-204ENST00000403890 SRRM3A6NNA2 597 aaPredicted RBP10.41□□□□□ -0.74
NUP43-204ENST00000403890 CHURC1-FNTBB4DL54 471 aa10.41□□□□□ -0.74
NUP43-204ENST00000403890 E7EWF7 191 aa10.41□□□□□ -0.74
NUP43-204ENST00000403890 XYLBO75191 536 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms