RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 FEZ2Q9UHY8 353 aaPredicted RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PCDHA10Q9Y5I2 948 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 DOCK5Q9H7D0 1870 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 AKAP3O75969 853 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GLI1P08151 1106 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 HSDL1Q3SXM5 330 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GJC2Q5T442 439 aaPredicted RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ABHD15Q6UXT9 468 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MIER3Q7Z3K6 550 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 USP38Q8NB14 1042 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SPATA33Q96N06 139 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RUSC1Q9BVN2 902 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NAGPAQ9UK23 515 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TELO2Q9Y4R8 837 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 A6NNZ2 444 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 EIF3DO15371 548 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SORBS3O60504 671 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 DUSP11O75319 330 aaKnown RBP17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GCNT3O95395 438 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GUCY2DQ02846 1103 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SLC20A2Q08357 652 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NFIL3Q16649 462 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TUBB8Q3ZCM7 444 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 DCAF17Q5H9S7 520 aaPredicted RBP17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 FOXR1Q6PIV2 292 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 EIF1ADQ8N9N8 165 aaKnown RBP17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PPTC7Q8NI37 304 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 KRT12Q99456 494 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GPR20Q99678 358 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 EPB41L5Q9HCM4 733 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TMEM59LQ9UK28 342 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 INTUQ9ULD6 942 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NENFQ9UMX5 172 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SAMM50Q9Y512 469 aa17.24■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GSTTP1A0A1W2PQM5 241 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 KIF4AO95239 1232 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CNGA1P29973 690 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 JAM2P57087 298 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 FBXO46Q6PJ61 603 aaPredicted RBP17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SH3TC2Q8TF17 1288 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 WHAMMQ8TF30 809 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SLC35C1Q96A29 364 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TUFT1Q9NNX1 390 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SIX2Q9NPC8 291 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 LCMT1Q9UIC8 334 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CENPFP49454 3210 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 IGKV6D-21A0A0A0MT36 114 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 A0A0A6YYK5 440 aaPredicted RBP17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RSPH10B2B2RC85 870 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NOP56O00567 594 aaKnown RBP17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GFPT2O94808 682 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SLITRK3O94933 977 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PSAPP07602 524 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RSPH10BP0C881 870 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CARSP49589 748 aaKnown RBP17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 DNA2P51530 1060 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SP4Q02446 784 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CYP4A11Q02928 519 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ALKBH5Q6P6C2 394 aaKnown RBP17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TLK2Q86UE8 772 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 LRRC57Q8N9N7 239 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NEK9Q8TD19 979 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 LMBR1Q8WVP7 490 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CAPS2Q9BXY5 557 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RASSF4Q9H2L5 321 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 HMX1Q9NP08 348 aaPredicted RBP17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GCNT4Q9P109 453 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RSPH14Q9UHP6 348 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NFU1Q9UMS0 254 aa17.23■□□□□ 0.35
CHRFAM7A-203ENST00000401522 UBE4BO95155 1302 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 DYNC1LI2O43237 492 aaPredicted RBP17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 FAM13AO94988 1023 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 P4HBP07237 508 aaKnown RBP17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SUPT20HL2P0C7V6 817 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 FERP16591 822 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 IRAK1P51617 712 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NKX3-2P78367 333 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SKOR1P84550 965 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CFAP58Q5T655 872 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TCERG1LQ5VWI1 586 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RINT1Q6NUQ1 792 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 OR6J1Q8NGC5 347 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ACTRT1Q8TDG2 376 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RGL1Q9NZL6 768 aa17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PACSIN2Q9UNF0 486 aaPredicted RBP17.22■□□□□ 0.35
CHRFAM7A-203ENST00000401522 A6NJR5 290 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 KCNK3O14649 394 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RARBP10826 455 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MUTP22033 750 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TCF7P36402 384 aaPredicted RBP17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NOP2P46087 812 aaKnown RBP17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CD302Q8IX05 232 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 IQCKQ8N0W5 287 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms