RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 MLXIPLQ9NP71 852 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 HDAC6Q9UBN7 1215 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 DCTN4Q9UJW0 460 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 DIAPH2O60879 1101 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 MOCS2O96007 188 aaPredicted RBP19.61■□□□□ 0.73
USP25-204ENST00000400183 KCNV1Q6PIU1 500 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 HADHAP40939 763 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 ZC3H18Q86VM9 953 aaKnown RBP19.61■□□□□ 0.73
USP25-204ENST00000400183 OR6P1Q8NGX9 317 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 TNIP3Q96KP6 325 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 TIPINQ9BVW5 301 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 CCSER1Q9C0I3 900 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 TGS1Q96RS0 853 aaKnown RBP19.61■□□□□ 0.73
USP25-204ENST00000400183 AGPAT1Q99943 283 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 ABCA8O94911 1581 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 RMDN2Q96LZ7 410 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 ING2Q9H160 280 aa19.61■□□□□ 0.73
USP25-204ENST00000400183 FOXN1O15353 648 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 TYK2P29597 1187 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 JPH1Q9HDC5 661 aaPredicted RBP19.6■□□□□ 0.73
USP25-204ENST00000400183 FARP1Q9Y4F1 1045 aaPredicted RBP19.6■□□□□ 0.73
USP25-204ENST00000400183 CCDC195A0A1B0GUA6 201 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 RAD51Q06609 339 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 ANKRD40Q6AI12 368 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 RASSF3Q86WH2 238 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 SRBD1Q8N5C6 995 aaKnown RBP19.6■□□□□ 0.73
USP25-204ENST00000400183 EGFL8Q99944 293 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 SIK2Q9H0K1 926 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 TRPV6Q9H1D0 765 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 RPAP3Q9H6T3 665 aaPredicted RBP19.6■□□□□ 0.73
USP25-204ENST00000400183 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.6■□□□□ 0.73
USP25-204ENST00000400183 SCARF1Q14162 830 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 C1orf54Q8WWF1 131 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 ATP6V1G3Q96LB4 118 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 TRIM9Q9C026 710 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 SLC24A3Q9HC58 644 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 HNRNPCL2B2RXH8 293 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 HNRNPCL1O60812 293 aaKnown RBP19.6■□□□□ 0.73
USP25-204ENST00000400183 YWHABP31946 246 aaKnown RBP19.6■□□□□ 0.73
USP25-204ENST00000400183 SLC1A1P43005 524 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 BTBD8Q5XKL5 378 aa19.6■□□□□ 0.73
USP25-204ENST00000400183 SLC16A3O15427 465 aaKnown RBP19.59■□□□□ 0.73
USP25-204ENST00000400183 EFTUD2Q15029 972 aaKnown RBP eCLIP19.59■□□□□ 0.73
USP25-204ENST00000400183 RNF149Q8NC42 400 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 SCHIP1Q9P0W5 487 aaPredicted RBP19.59■□□□□ 0.73
USP25-204ENST00000400183 FBXO2Q9UK22 296 aaPredicted RBP19.59■□□□□ 0.73
USP25-204ENST00000400183 STAT5BP51692 787 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 LBRQ14739 615 aaKnown RBP19.59■□□□□ 0.73
USP25-204ENST00000400183 RNPC3Q96LT9 517 aaKnown RBP19.59■□□□□ 0.73
USP25-204ENST00000400183 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 F5H423 210 aaPredicted RBP19.59■□□□□ 0.73
USP25-204ENST00000400183 PPP1R12AO14974 1030 aaPredicted RBP19.59■□□□□ 0.73
USP25-204ENST00000400183 MFSD14CQ5VZR4 134 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 A2ML1A8K2U0 1454 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 RTN2O75298 545 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 NMT1P30419 496 aaKnown RBP19.59■□□□□ 0.73
USP25-204ENST00000400183 ACTR2P61160 394 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 CDK17Q00537 523 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 PID1Q7Z2X4 250 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 TRIM54Q9BYV2 358 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 SLC13A1Q9BZW2 595 aa19.59■□□□□ 0.73
USP25-204ENST00000400183 RNF103-CHMP3A0A140T963 221 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 MCF2P10911 925 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 SCP2P22307 547 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 PTK2BQ14289 1009 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 RAPGEF5Q92565 580 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 NSUN4Q96CB9 384 aaKnown RBP19.58■□□□□ 0.73
USP25-204ENST00000400183 HOXD10P28358 340 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 NFIXQ14938 502 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 TEX12Q9BXU0 123 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 KCNF1Q9H3M0 494 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 LIMA1Q9UHB6 759 aaKnown RBP19.58■□□□□ 0.73
USP25-204ENST00000400183 MRFAP1Q9Y605 127 aa19.58■□□□□ 0.73
USP25-204ENST00000400183 AFF2P51816 1311 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 APOL1O14791 398 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 CYP26A1O43174 497 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 ATP1A1P05023 1023 aaKnown RBP19.58■□□□□ 0.72
USP25-204ENST00000400183 CPB1P15086 417 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 SPATA4Q8NEY3 305 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 WARS2Q9UGM6 360 aaKnown RBP19.58■□□□□ 0.72
USP25-204ENST00000400183 FBXL5Q9UKA1 691 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 DGAT1O75907 488 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 ARSEP51690 589 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 EXOSC10Q01780 885 aaKnown RBP19.58■□□□□ 0.72
USP25-204ENST00000400183 TEKT2Q9UIF3 430 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 PLA2R1Q13018 1463 aa19.58■□□□□ 0.72
USP25-204ENST00000400183 SYCE1LA8MT33 242 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 PRKCBP05771 671 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 GUCY1A2P33402 732 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 HSD17B4P51659 736 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 KCNA1Q09470 495 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 ZNF235Q14590 738 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 NCAPHQ15003 741 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
USP25-204ENST00000400183 METTL16Q86W50 562 aaKnown RBP19.57■□□□□ 0.72
USP25-204ENST00000400183 LZICQ8WZA0 190 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 NDE1Q9NXR1 346 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 RGL1Q9NZL6 768 aa19.57■□□□□ 0.72
USP25-204ENST00000400183 AARSP49588 968 aaKnown RBP eCLIP19.57■□□□□ 0.72
USP25-204ENST00000400183 KRT17Q04695 432 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms