RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TMEM161AQ9NX61 479 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ANKFY1Q9P2R3 1169 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 HOOK1Q9UJC3 728 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 IPPQ9Y573 584 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TRIOBPQ9H2D6 2365 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 A0A0B4J269 797 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 HNRNPDLO14979 420 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ARHGEF15O94989 841 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 GJB5O95377 273 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 IBSPP21815 317 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ABCD1P33897 745 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 LIG4P49917 911 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 AFF1P51825 1210 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 HTRA4P83105 476 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZNF568Q3ZCX4 644 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SEZ6Q53EL9 994 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 COBLL1Q53SF7 1204 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CLLU1OSQ5K130 101 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 FAM117BQ6P1L5 589 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 AGMOQ6ZNB7 445 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZBTB33Q86T24 672 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZSWIM2Q8NEG5 633 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 PHOSPHO2Q8TCD6 241 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 BICD1Q96G01 975 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MTIF3Q9H2K0 278 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 RMND1Q9NWS8 449 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 LAMA3Q16787 3333 aa13.59□□□□□ -0.23
HLA-DQB1-203ENST00000399082 A0A1W2PPC1 479 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 DGKIO75912 1065 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 UPP2O95045 317 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 MCF2P10911 925 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 HARSP12081 509 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PRCPP42785 496 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 RAB27AP51159 221 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 RABGGTBP53611 331 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 NCBP1Q09161 790 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 NOLC1Q14978 699 aaKnown RBP eCLIP13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 KNOP1Q1ED39 458 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 KLHL40Q2TBA0 621 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 DCAF4L1Q3SXM0 396 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ZCWPW2Q504Y3 356 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GUF1Q8N442 669 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ZNF689Q96CS4 500 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TMEM206Q9H813 350 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 AGPAT3Q9NRZ7 376 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
HLA-DQB1-203ENST00000399082 KIAA1671Q9BY89 1806 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ANK1P16157 1881 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 RALGAPA2Q2PPJ7 1873 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 LCHNA4D1U4 455 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 EOMESO95936 686 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 LINC00271P0C7V0 271 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 MYOGP15173 224 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 AKAP5P24588 427 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PBX2P40425 430 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TNFSF9P41273 254 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GRM5P41594 1212 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PMS1P54277 932 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CCDC183Q5T5S1 534 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CAVIN1Q6NZI2 390 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CRELD2Q6UXH1 353 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ADSSL1Q8N142 457 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 RNF169Q8NCN4 708 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GSTCDQ8NEC7 633 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CCDC47Q96A33 483 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CASD1Q96PB1 797 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ADPGKQ9BRR6 497 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 APOL6Q9BWW8 343 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GBP3Q9H0R5 595 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SEMA6BQ9H3T3 888 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SNTG2Q9NY99 539 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 EXOC7Q9UPT5 735 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 YBX2Q9Y2T7 364 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TRIP11Q15643 1979 aa13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PDCD11Q14690 1871 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PPP1R3GB7ZBB8 358 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 OGTO15294 1046 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 INPPL1O15357 1258 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CLDN3O15551 220 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 B4GALT3O60512 393 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 OFD1O75665 1012 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 RECQL4O94761 1208 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 STAG3L1P0CL83 205 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SKIP12755 728 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ITGA4P13612 1032 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GARTP22102 1010 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 WNT7BP56706 349 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 LRIT3Q3SXY7 679 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 LRRC55Q6ZSA7 311 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SPRED2Q7Z698 418 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 C12orf56Q8IXR9 622 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 THNSL1Q8IYQ7 743 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms