RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SEMA3FQ13275 785 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 ACCSLQ4AC99 568 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 NCAPG2Q86XI2 1143 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 B4GALNT2Q8NHY0 566 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 LXNQ9BS40 222 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 TSPYL2Q9H2G4 693 aaPredicted RBP15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 ALG13Q9NP73 1137 aaKnown RBP15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 HAO1Q9UJM8 370 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 TTC7AQ9ULT0 858 aaPredicted RBP15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 MYBP10242 640 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 LMNB2Q03252 620 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 ITGB3BPQ13352 177 aaPredicted RBP15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 BBS9Q3SYG4 887 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 SLC27A3Q5K4L6 730 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 PARD3BQ8TEW8 1205 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 C9orf72Q96LT7 481 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 RMDN3Q96TC7 470 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 AS3MTQ9HBK9 375 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 FMN2Q9NZ56 1722 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 MARK3P27448 753 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 PGM1P36871 562 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 BAG6P46379 1132 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 MTMR1Q13613 665 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 KYNUQ16719 465 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 RNF8O76064 485 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 ZCCHC18P0CG32 403 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 DNAJC3Q13217 504 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 KCNV1Q6PIU1 500 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 FBXO25Q8TCJ0 367 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 REXO2Q9Y3B8 237 aaKnown RBP15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 PITPNM2Q9BZ72 1349 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 JCADQ9P266 1359 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 LRRC10BA6NIK2 292 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 SPECC1L-ADORA2AF8WAN1 911 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 ZC2HC1CQ53FD0 456 aaPredicted RBP15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 TATDN2Q93075 761 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 HSD3B7Q9H2F3 369 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 PCDHB4Q9Y5E5 795 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 TAL1P17542 331 aaPredicted RBP15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 CCNHP51946 323 aaPredicted RBP15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 AP2B1P63010 937 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 OLFML2BQ68BL8 750 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 RGS9BPQ6ZS82 235 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 RASSF3Q86WH2 238 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 TRIML2Q8N7C3 387 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 DAGLBQ8NCG7 672 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 ATP2A3Q93084 1043 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 NPHS2Q9NP85 383 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 A1CFQ9NQ94 594 aaKnown RBP15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 ANLNQ9NQW6 1124 aa15.53■□□□□ 0.08
RPRD1A-202ENST00000399022 NDC80O14777 642 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 FTLP02792 175 aaPredicted RBP15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 SLC30A10Q6XR72 485 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 MAP7D3Q8IWC1 876 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 SLC35G2Q8TBE7 412 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 SEMA6BQ9H3T3 888 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 UBN1Q9NPG3 1134 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 ABCF3Q9NUQ8 709 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 PRR12Q9ULL5 1215 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 SUGT1Q9Y2Z0 365 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 CNGA1P29973 690 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 VHLP40337 213 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 IGBP1P78318 339 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 CDK17Q00537 523 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 FIGNQ5HY92 759 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 BSPRYQ5W0U4 402 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 GADL1Q6ZQY3 521 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 LDHDQ86WU2 507 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 DNAAF5Q86Y56 855 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 SLC7A3Q8WY07 619 aa15.52■□□□□ 0.08
RPRD1A-202ENST00000399022 F8VZ95 297 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 CDH16O75309 829 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 SLURP2P0DP57 97 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 ITGA4P13612 1032 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 UCHL3P15374 230 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 SERPINB3P29508 390 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 FXR2P51116 673 aaKnown RBP eCLIP15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 GPC5P78333 572 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 CEP55Q53EZ4 464 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 WDR59Q6PJI9 974 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 C4orf33Q8N1A6 199 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 PYROXD1Q8WU10 500 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 MOV10L1Q9BXT6 1211 aaKnown RBP15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 MIS12Q9H081 205 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 GDF3Q9NR23 364 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 ESYT2A0FGR8 921 aa15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 BZW1Q7L1Q6 419 aaKnown RBP15.52■□□□□ 0.07
RPRD1A-202ENST00000399022 FAM237AA0A1B0GTK4 181 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 DNAJC6O75061 913 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 MX2P20592 715 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 KRT17Q04695 432 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 SPP2Q13103 211 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 RCN1Q15293 331 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 XXYLT1Q8NBI6 393 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 GGA2Q9UJY4 613 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 GSCP56915 257 aaPredicted RBP15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 OSTNP61366 133 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 KCNJ2P63252 427 aa15.51■□□□□ 0.07
RPRD1A-202ENST00000399022 KCNMA1Q12791 1236 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms