RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 GPC4O75487 556 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 HOXA10P31260 410 aaPredicted RBP15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 SLC8A1P32418 973 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 WDR72Q3MJ13 1102 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 CENPPQ6IPU0 288 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 SLC35G2Q8TBE7 412 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 MAP3K20Q9NYL2 800 aaKnown RBP15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 KIF1AQ12756 1690 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 BAZ2BQ9UIF8 2168 aaKnown RBP15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 ZNF185O15231 689 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 KLK7P49862 253 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 NCAPHQ15003 741 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 R3HDM1Q15032 1099 aaKnown RBP15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 PRAMEF18Q5VWM3 479 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 MMP14P50281 582 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 CLNS1AP54105 237 aaKnown RBP15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 FAM102AQ5T9C2 384 aaPredicted RBP15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 CDKAL1Q5VV42 579 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 REXO1L1PQ8IX06 675 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 SAMD3Q8N6K7 520 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 KLHL29Q96CT2 875 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 KIF12Q96FN5 646 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 TMEM8AQ9HCN3 771 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 AGPAT3Q9NRZ7 376 aa15.14■□□□□ 0.01
PCDHGA11-201ENST00000398587 MAGEB2O15479 319 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 NCOA4Q13772 614 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 NUGGCQ68CJ6 796 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 CFAP61Q8NHU2 1237 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 HACL1Q9UJ83 578 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 MID2Q9UJV3 735 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 HEY1Q9Y5J3 304 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 SHMT1P34896 483 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 KPNA2P52292 529 aaKnown RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 ARPP19P56211 112 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 MAP7Q14244 749 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 THEM5Q8N1Q8 247 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 CFAP36Q96G28 342 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 ACAP3Q96P50 834 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 TACO1Q9BSH4 297 aaKnown RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 ZCCHC17Q9NP64 241 aaKnown RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 SCAF8Q9UPN6 1271 aaKnown RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 ASAP2O43150 1006 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 NOL3O60936 208 aaKnown RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 TMEM253P0C7T8 217 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 ILDR1Q86SU0 546 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 SMYD2Q9NRG4 433 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 TTC7AQ9ULT0 858 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 PCDHB2Q9Y5E7 798 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 MMEP08473 750 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 CDC42EP1Q00587 391 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 THOC5Q13769 683 aaKnown RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 UNC45AQ9H3U1 944 aa15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 ACTR5Q9H9F9 607 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA11-201ENST00000398587 SPDYE16A6NNV3 312 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 A8MXQ7 604 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 BCAR1P56945 870 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 MAGOHP61326 146 aaKnown RBP15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 SPARCL1Q14515 664 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 GDAP1Q8TB36 358 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 DNAJC7Q99615 494 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 RUSC1Q9BVN2 902 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 UBR1Q8IWV7 1749 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 RASA4BC9J798 803 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 RASA4O43374 803 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 SGSM1Q2NKQ1 1148 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 WDR35Q9P2L0 1181 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 KRT14P02533 472 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 KLRC1P26715 233 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 SNAPC2Q13487 334 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 GTF3C2Q8WUA4 911 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 C1orf54Q8WWF1 131 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 C18orf8Q96DM3 657 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 SNF8Q96H20 258 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 VIPAS39Q9H9C1 493 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 FBXL5Q9UKA1 691 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 GOLGA8QA0A0J9YX86 632 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 GOLGA8OA6NCC3 632 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 GOLGA8NF8WBI6 632 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 EARS2Q5JPH6 523 aaKnown RBP15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 SCFD2Q8WU76 684 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 INTUQ9ULD6 942 aa15.12■□□□□ 0.01
PCDHGA11-201ENST00000398587 CTIFO43310 598 aaKnown RBP15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 KRT38O76015 456 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 GPS1Q13098 491 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 MUM1L1Q5H9M0 696 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 IER5Q5VY09 327 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 RBBP8NLQ8NC74 664 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 ATL2Q8NHH9 583 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 HLA-DRAP01903 254 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 KRT3P12035 628 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 KLHL38Q2WGJ6 581 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 Q4G0T1 1027 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 FAM83AQ86UY5 434 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 SLC30A5Q8TAD4 765 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms