RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SLC9A1P19634 815 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 STX2P32856 288 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 LSP1P33241 339 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PIK3CGP48736 1102 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 MYL6P60660 151 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 GNG11P61952 73 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 STX5Q13190 355 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ARHGEF7Q14155 803 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 LONRF3Q496Y0 759 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 TTC31Q49AM3 519 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 TMTC4Q5T4D3 741 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZDHHC20Q5W0Z9 365 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 DNAJC24Q6P3W2 148 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 NOTUMQ6P988 496 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 TERB1Q8NA31 727 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZSCAN1Q8NBB4 408 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ACSBG1Q96GR2 724 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ACAD9Q9H845 621 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SLC25A13Q9UJS0 675 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CLCA2Q9UQC9 943 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ADAMTSL3P82987 1691 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SFI1A8K8P3 1242 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 STK25O00506 426 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 TNNT1P13805 278 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SKIDA1Q1XH10 827 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SYTL3Q4VX76 610 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SYDE2Q5VT97 1194 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 NCAPH2Q6IBW4 605 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CCDC149Q6ZUS6 474 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CHST13Q8NET6 341 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 DNERQ8NFT8 737 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 WHAMMQ8TF30 809 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 STAG1Q8WVM7 1258 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ASIC4Q96FT7 647 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 POLR3CQ9BUI4 534 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZNF556Q9HAH1 456 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 VPS54Q9P1Q0 977 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PACSIN3Q9UKS6 424 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 EFR3BQ9Y2G0 817 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 STRCQ7RTU9 1775 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 AFF2P51816 1311 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 NHSL1Q5SYE7 1610 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 NEURL1BA8MQ27 555 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 NR2C1P13056 603 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 TPP2P29144 1249 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 SF3A3Q12874 501 aaKnown RBP eCLIP2.89□□□□□ -1.95
CHD9-202ENST00000398510 KCNB1Q14721 858 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PKN2Q16513 984 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 CENPUQ71F23 418 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 EID3Q8N140 333 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ATP6V1E2Q96A05 226 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PAIP2Q9BPZ3 127 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 XAB2Q9HCS7 855 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 PA2G4Q9UQ80 394 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 RBM8AQ9Y5S9 174 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 PSMD12O00232 456 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 TRIM66O15016 1216 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 TADA3O75528 432 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 GCATO75600 419 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CYP2C8P10632 490 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 DNAJB2P25686 324 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CCT5P48643 541 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 RGS4P49798 205 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 DCTN2Q13561 401 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 ZNF667Q5HYK9 610 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CES5AQ6NT32 575 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 POTEAQ6S8J7 498 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 RDH13Q8NBN7 331 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 FBXO41Q8TF61 875 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 HDAC11Q96DB2 347 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 TMEM169Q96HH4 297 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 PRPF18Q99633 342 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 SGIP1Q9BQI5 828 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 IL1RAPL2Q9NP60 686 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SCHIP1Q9P0W5 487 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 CTNND2Q9UQB3 1225 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 GINS2Q9Y248 185 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 TMEM232C9JQI7 657 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 RGS16O15492 202 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 C21orf2O43822 256 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 H2AFZP0C0S5 128 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 MCF2P10911 925 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 MYL4P12829 197 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CES1P23141 567 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ST13P50502 369 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 CCT8P50990 548 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SCNN1DP51172 638 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ATXN3P54252 364 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 ITGA9Q13797 1035 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 DHX34Q14147 1143 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 STARD3Q14849 445 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 STRIP1Q5VSL9 837 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 H2AFVQ71UI9 128 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SPATA2LQ8IUW3 424 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 TPH2Q8IWU9 490 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 DCP1BQ8IZD4 617 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 CASP10Q92851 521 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CHMP6Q96FZ7 201 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 RMND5BQ96G75 393 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 CABS1Q96KC9 395 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms