RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 PCDHB2Q9Y5E7 798 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 TOM1L1O75674 476 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 KRT17Q04695 432 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 SLC29A2Q14542 456 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 GPD1LQ8N335 351 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 NLRP7Q8WX94 980 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 PPARGC1AQ9UBK2 798 aaKnown RBP13.24□□□□□ -0.29
SOCS6-201ENST00000397942 MROH1Q8NDA8 1641 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 GSTA1P08263 222 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 GSTA2P09210 222 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 HMGCS2P54868 508 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 BCAR1P56945 870 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 TAF11Q15544 211 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 CATSPER4Q7RTX7 472 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 ZBED8Q8IZ13 594 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 ACER1Q8TDN7 264 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 HSPH1Q92598 858 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 DDX23Q9BUQ8 820 aaKnown RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 SNX25Q9H3E2 840 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 STRIP2Q9ULQ0 834 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 KRT38O76015 456 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 RXRBP28702 533 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 COPB2P35606 906 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 NFX1Q12986 1120 aaKnown RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 PDIA2Q13087 525 aaKnown RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 DALRD3Q5D0E6 543 aaKnown RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 XKR3Q5GH77 459 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 FBXW10Q5XX13 1052 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 RBM15Q96T37 977 aaKnown RBP eCLIP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 RTFDC1Q9BY42 306 aaPredicted RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 PIM2Q9P1W9 311 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 SUCLA2Q9P2R7 463 aaPredicted RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 G3BP2Q9UN86 482 aaKnown RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 COPEO14579 308 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 GGPS1O95749 300 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 GARSP41250 739 aaKnown RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 RAPH1Q70E73 1250 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 FBXO25Q8TCJ0 367 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 FAM151AQ8WW52 585 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 MAML1Q92585 1016 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 FAM167AQ96KS9 214 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 TLR10Q9BXR5 811 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 KCNH7Q9NS40 1196 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 UBE4BO95155 1302 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 OPHN1O60890 802 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 SASH3O75995 380 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 WDR75Q8IWA0 830 aaKnown RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 DCLK2Q8N568 766 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 MCUQ8NE86 351 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 TTC25Q96NG3 672 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 POLR3FQ9H1D9 316 aaPredicted RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 ECE1P42892 770 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 ZNF473Q8WTR7 871 aaKnown RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 N4BP2L2Q92802 583 aaPredicted RBP13.23□□□□□ -0.29
SOCS6-201ENST00000397942 FAF2Q96CS3 445 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 OSBPL8Q9BZF1 889 aa13.23□□□□□ -0.29
SOCS6-201ENST00000397942 SPATA31D1Q6ZQQ2 1576 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 DCTN3O75935 186 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 LUC7L3O95232 432 aaKnown RBP13.22□□□□□ -0.29
SOCS6-201ENST00000397942 SKIP12755 728 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 SLC30A10Q6XR72 485 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 TPCN2Q8NHX9 752 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 TGS1Q96RS0 853 aaKnown RBP13.22□□□□□ -0.29
SOCS6-201ENST00000397942 ACAD9Q9H845 621 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 GGT7Q9UJ14 662 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 FAM107AO95990 144 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 PLA2G4FQ68DD2 849 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 JPH1Q9HDC5 661 aaPredicted RBP13.22□□□□□ -0.29
SOCS6-201ENST00000397942 SCAF8Q9UPN6 1271 aaKnown RBP13.22□□□□□ -0.29
SOCS6-201ENST00000397942 AGTP01019 485 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 PON1P27169 355 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 SDC4P31431 198 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 SSTR3P32745 418 aaPredicted RBP13.22□□□□□ -0.29
SOCS6-201ENST00000397942 DBN1Q16643 649 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 POLR3CQ9BUI4 534 aaPredicted RBP13.22□□□□□ -0.29
SOCS6-201ENST00000397942 GYG2O15488 501 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 ITKQ08881 620 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 RNF149Q8NC42 400 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 HDAC7Q8WUI4 952 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 CPA5Q8WXQ8 436 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 XPO6Q96QU8 1125 aaKnown RBP13.22□□□□□ -0.29
SOCS6-201ENST00000397942 KLC2Q9H0B6 622 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 ZNF302Q9NR11 478 aa13.22□□□□□ -0.29
SOCS6-201ENST00000397942 DBR1Q9UK59 544 aaKnown RBP13.22□□□□□ -0.29
SOCS6-201ENST00000397942 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.29
SOCS6-201ENST00000397942 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
SOCS6-201ENST00000397942 ARSEP51690 589 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 MTM1Q13496 603 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 DNAAF5Q86Y56 855 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 LPAR1Q92633 364 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 SNF8Q96H20 258 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 GTF3C4Q9UKN8 822 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms