RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 GPS1Q13098 491 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 SYTL3Q4VX76 610 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 CCNYL1Q8N7R7 359 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 CHGBP05060 677 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 TPI1P60174 286 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 NAALADL2Q58DX5 795 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 FDX1P10109 184 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 LIG3P49916 1009 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 PROM2Q8N271 834 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 CPA5Q8WXQ8 436 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 CYP26A1O43174 497 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 PPFIA2O75334 1257 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 TMPRSS15P98073 1019 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 PRKCEQ02156 737 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 ANKRD13AQ8IZ07 590 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 ABHD10Q9NUJ1 306 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 IP6K2Q9UHH9 426 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 EEF1B2P24534 225 aaKnown RBP12.05□□□□□ -0.48
TTC28-201ENST00000397906 WDR48Q8TAF3 677 aa12.05□□□□□ -0.48
TTC28-201ENST00000397906 PFASO15067 1338 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 GTF2A2P52657 109 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 EMC2Q15006 297 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ANKRD20A4Q4UJ75 823 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ANKRD20A8PQ5CZ79 823 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ANKRD20A2Q5SQ80 823 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ANKRD20A1Q5TYW2 823 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 CCDC197Q8NCU1 140 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 USP33Q8TEY7 942 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 COPEO14579 308 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ZSCAN26Q16670 478 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 DRC3Q9H069 523 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 FAM49BQ9NUQ9 324 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ALDH7A1P49419 539 aaKnown RBP12.04□□□□□ -0.48
TTC28-201ENST00000397906 TMEM259Q4ZIN3 620 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 GLB1LQ6UWU2 654 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
TTC28-201ENST00000397906 ZBTB18Q99592 522 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 PRR12Q9ULL5 1215 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.04□□□□□ -0.48
TTC28-201ENST00000397906 A0A0G2JND7 137 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 TMCC1O94876 653 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ATG16L1Q676U5 607 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 DCUN1D1Q96GG9 259 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 PPP1R36Q96LQ0 422 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 HSPBP1Q9NZL4 362 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 NR3C2P08235 984 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 CDR2LQ86X02 465 aaPredicted RBP12.04□□□□□ -0.48
TTC28-201ENST00000397906 KLK14Q9P0G3 267 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 RSPH10B2B2RC85 870 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 RSPH10BP0C881 870 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 EPHX2P34913 555 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 NEDD1Q8NHV4 660 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 SLC30A5Q8TAD4 765 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ZCWPW1Q9H0M4 648 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 CYP2C9P11712 490 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 BCAR1P56945 870 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 LZICQ8WZA0 190 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 SH3BP1Q9Y3L3 701 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 PGK2P07205 417 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 SMARCA1P28370 1054 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 HIPK4Q8NE63 616 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 SNX24Q9Y343 169 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 KRT37O76014 449 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
TTC28-201ENST00000397906 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 NCK2O43639 380 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 NPTXRO95502 500 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 ZNF543Q08ER8 600 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 AGAP3Q96P47 875 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 TFDP2Q14188 446 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 SRRM1Q8IYB3 904 aaKnown RBP12.03□□□□□ -0.48
TTC28-201ENST00000397906 SCG3Q8WXD2 468 aaKnown RBP12.03□□□□□ -0.48
TTC28-201ENST00000397906 PCSK7Q16549 785 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 PDCD7Q8N8D1 485 aaKnown RBP12.03□□□□□ -0.48
TTC28-201ENST00000397906 PRG3Q9Y2Y8 225 aaPredicted RBP12.03□□□□□ -0.48
TTC28-201ENST00000397906 SPATA31A5Q5VU36 1347 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 SPATA31A7Q8IWB4 1347 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 RASA4BC9J798 803 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 RASA4O43374 803 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 DDHD2O94830 711 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 KLRK1P26718 216 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 ALDH1A3P47895 512 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 TRAIPQ9BWF2 469 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 PARVAQ9NVD7 372 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 SENP1Q9P0U3 644 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 NNTQ13423 1086 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 DDX50Q9BQ39 737 aaKnown RBP12.03□□□□□ -0.48
TTC28-201ENST00000397906 CYP26B1Q9NR63 512 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 KRT17Q04695 432 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 SDE2Q6IQ49 451 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 ZBED8Q8IZ13 594 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 STKLD1Q8NE28 680 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
TTC28-201ENST00000397906 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
TTC28-201ENST00000397906 COPS2P61201 443 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 EPHA7Q15375 998 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 ZNF34Q8IZ26 560 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms