RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MYO1AQ9UBC5 1043 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 GTF2IRD1Q9UHL9 959 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 ZRANB2O95218 330 aaKnown RBP eCLIP21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 GYPCP04921 128 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 EDN1P05305 212 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 GARTP22102 1010 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 ACLYP53396 1101 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 CDC42EP1Q00587 391 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 PPP2R3AQ06190 1150 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 SLC9C1Q4G0N8 1177 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 RSRC2Q7L4I2 434 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 IFNLR1Q8IU57 520 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 RDH13Q8NBN7 331 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 RABGGTAQ92696 567 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 MRPL4Q9BYD3 311 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 UNC93B1Q9H1C4 597 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 FZD8Q9H461 694 aa21.03■□□□□ 0.96
PDLIM2-204ENST00000397760 KIF5CO60282 957 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 CABYRO75952 493 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 MBTD1Q05BQ5 628 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 FAM47CQ5HY64 1035 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 RAD9BQ6WBX8 426 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 ZNF410Q86VK4 478 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 DNAJB3Q8WWF6 145 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 VTI1AQ96AJ9 217 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 BORCS6Q96GS4 357 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 MINDY3Q9H8M7 445 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 STYXL1Q9Y6J8 313 aa21.02■□□□□ 0.96
PDLIM2-204ENST00000397760 CEP350Q5VT06 3117 aa21.02■□□□□ 0.95
PDLIM2-204ENST00000397760 SOWAHDA6NJG2 315 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 ACKR2O00590 384 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 CASP14P31944 242 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 TMEM62Q0P6H9 643 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 FKBP15Q5T1M5 1219 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 SLFN12LQ6IEE8 588 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 ZPBP2Q6X784 338 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 ZSWIM2Q8NEG5 633 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 SAAL1Q96ER3 474 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 TSEN34Q9BSV6 310 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 A0A1W2PQC6 194 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 GOLGA8IPA6NC78 632 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 MOXD2PA6NHM9 499 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 GOLGA8JA6NMD2 632 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 TTLL13PA6NNM8 815 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 KIZQ2M2Z5 673 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 GDF6Q6KF10 455 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 CYP26C1Q6V0L0 522 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 SESTD1Q86VW0 696 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 ARRDC4Q8NCT1 418 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 ZBTB45Q96K62 511 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 ACO2Q99798 780 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 ADAMTS10Q9H324 1103 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 PRMT7Q9NVM4 692 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 FHOD1Q9Y613 1164 aa21.01■□□□□ 0.95
PDLIM2-204ENST00000397760 GRIN2DO15399 1336 aa21■□□□□ 0.95
PDLIM2-204ENST00000397760 CSDE1O75534 798 aaKnown RBP21■□□□□ 0.95
PDLIM2-204ENST00000397760 MYCP01106 439 aaPredicted RBP21■□□□□ 0.95
PDLIM2-204ENST00000397760 MATR3P43243 847 aaKnown RBP eCLIP21■□□□□ 0.95
PDLIM2-204ENST00000397760 PRPF4BQ13523 1007 aaKnown RBP21■□□□□ 0.95
PDLIM2-204ENST00000397760 DCAF17Q5H9S7 520 aaPredicted RBP21■□□□□ 0.95
PDLIM2-204ENST00000397760 TCERG1LQ5VWI1 586 aa21■□□□□ 0.95
PDLIM2-204ENST00000397760 TAF2Q6P1X5 1199 aa21■□□□□ 0.95
PDLIM2-204ENST00000397760 GOLGA1Q92805 767 aa21■□□□□ 0.95
PDLIM2-204ENST00000397760 ABHD10Q9NUJ1 306 aa21■□□□□ 0.95
PDLIM2-204ENST00000397760 EVPLQ92817 2033 aa21■□□□□ 0.95
PDLIM2-204ENST00000397760 MAPK13O15264 365 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 GPR32O75388 356 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 IQCF3P0C7M6 154 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 HSPA8P11142 646 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 KCNH2Q12809 1159 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 ITGA7Q13683 1181 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 MTFR1Q15390 333 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 FAM187BQ17R55 369 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 SRGAP1Q7Z6B7 1085 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 NME8Q8N427 588 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 CEP112Q8N8E3 955 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 GLT1D1Q96MS3 346 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 DESI2Q9BSY9 194 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 ANKFY1Q9P2R3 1169 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 GINS2Q9Y248 185 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 KAT6AQ92794 2004 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 SCN10AQ9Y5Y9 1956 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 KIAA0391O15091 583 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 B4GALT5O43286 388 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 TOM1L1O75674 476 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 PNMA6AP0CW24 399 aaPredicted RBP20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 KRT13P13646 458 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 FXR1P51114 621 aaKnown RBP eCLIP20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 MTF1Q14872 753 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 SNRNP35Q16560 246 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 CBWD2Q8IUF1 395 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 GPD1LQ8N335 351 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 FBXL18Q96ME1 805 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 GCOM2Q9BZD3 368 aaPredicted RBP20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 HAPLN2Q9GZV7 340 aa20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 PAK6Q9NQU5 681 aaPredicted RBP20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 AGO2Q9UKV8 859 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-204ENST00000397760 A0A0B4J269 797 aa20.98■□□□□ 0.95
PDLIM2-204ENST00000397760 CLDN3O15551 220 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms