RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 SUCLA2Q9P2R7 463 aaPredicted RBP16.71■□□□□ 0.27
PPM1F-202ENST00000397495 TRIM10Q9UDY6 481 aa16.71■□□□□ 0.27
PPM1F-202ENST00000397495 DAAM1Q9Y4D1 1078 aa16.71■□□□□ 0.27
PPM1F-202ENST00000397495 GJB1P08034 283 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 SMIM10L2AP0DMW4 78 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 SMIM10L2BP0DMW5 78 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 SNRPFP62306 86 aaKnown RBP16.7■□□□□ 0.26
PPM1F-202ENST00000397495 LAMTOR4Q0VGL1 99 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 MTHFD1LQ6UB35 978 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 RHPN2Q8IUC4 686 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 IFIH1Q9BYX4 1025 aaKnown RBP16.7■□□□□ 0.26
PPM1F-202ENST00000397495 TMEM206Q9H813 350 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 TBX20Q9UMR3 447 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 ATP8B3O60423 1300 aa16.7■□□□□ 0.26
PPM1F-202ENST00000397495 DNAH12Q6ZR08 3092 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 MAGEB2O15479 319 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 ADAMTS4O75173 837 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 SRGAP2CP0DJJ0 459 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 PRLRP16471 622 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 PON1P27169 355 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 ANXA13P27216 316 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 POLR2FP61218 127 aaKnown RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 CYP27A1Q02318 531 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 MARCH8Q5T0T0 291 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 KLHDC7AQ5VTJ3 777 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 CXCL17Q6UXB2 119 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 HS2ST1Q7LGA3 356 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 LMBR1Q8WVP7 490 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 ZNF668Q96K58 619 aaPredicted RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 ARGLU1Q9NWB6 273 aaPredicted RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 OGFRQ9NZT2 677 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 ARHGAP28Q9P2N2 729 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 DDX20Q9UHI6 824 aaKnown RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 KCNG1Q9UIX4 513 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 BRCA2P51587 3418 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 TRIP12Q14669 1992 aaPredicted RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 TISP43B9A030 160 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 HAS3O00219 553 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 ATP8B1O43520 1251 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 AKR1B10O60218 316 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 PRKCIP41743 596 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 CASP4P49662 377 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 CTCFP49711 727 aaPredicted RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 GBP6Q6ZN66 633 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 MSANTD4Q8NCY6 345 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 TRIM58Q8NG06 486 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 KATNAL1Q9BW62 490 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 AGPAT3Q9NRZ7 376 aa16.69■□□□□ 0.26
PPM1F-202ENST00000397495 BZW2Q9Y6E2 419 aaKnown RBP16.69■□□□□ 0.26
PPM1F-202ENST00000397495 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 H0YCG3 227 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 ZEB2O60315 1214 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 KPNA6O60684 536 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 ZRANB2O95218 330 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPM1F-202ENST00000397495 MAGEA1P43355 309 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 CLCN6P51797 869 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 EXOC3L4Q17RC7 722 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 TAS1R3Q7RTX0 852 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 MAP4K3Q8IVH8 894 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 RNF149Q8NC42 400 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 SECISBP2LQ93073 1101 aaKnown RBP16.68■□□□□ 0.26
PPM1F-202ENST00000397495 HVCN1Q96D96 273 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 NLRP4Q96MN2 994 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 MTG1Q9BT17 334 aaPredicted RBP16.68■□□□□ 0.26
PPM1F-202ENST00000397495 HMX1Q9NP08 348 aaPredicted RBP16.68■□□□□ 0.26
PPM1F-202ENST00000397495 SIX2Q9NPC8 291 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 NLRC4Q9NPP4 1024 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 EXOC7Q9UPT5 735 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 AKT3Q9Y243 479 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 NRCAMQ92823 1304 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 SIP14410 1827 aa16.68■□□□□ 0.26
PPM1F-202ENST00000397495 K7ERI5 159 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 MAPK13O15264 365 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 TUBBP07437 444 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 UCHL3P15374 230 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 TMOD1P28289 359 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 CYP2J2P51589 502 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 KCNA10Q16322 511 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 SLC18A3Q16572 532 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 C10orf76Q5T2E6 689 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 NFRKBQ6P4R8 1299 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 IRF2BP2Q7Z5L9 587 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 FAM186BQ8IYM0 893 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 RPGRIP1Q96KN7 1286 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 PPP1R16BQ96T49 567 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 CRACR2AQ9BSW2 395 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 DEF6Q9H4E7 631 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 ZNF446Q9NWS9 450 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 JRKLQ9Y4A0 524 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
PPM1F-202ENST00000397495 VTNP04004 478 aa16.66■□□□□ 0.26
PPM1F-202ENST00000397495 ASGR1P07306 291 aa16.66■□□□□ 0.26
PPM1F-202ENST00000397495 HSPA8P11142 646 aaKnown RBP16.66■□□□□ 0.26
PPM1F-202ENST00000397495 ZSCAN20P17040 1043 aaPredicted RBP16.66■□□□□ 0.26
PPM1F-202ENST00000397495 SLC9A1P19634 815 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms