RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 KRT31Q15323 416 aa18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 DHX38Q92620 1227 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 SCLT1Q96NL6 688 aa18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 OSMRQ99650 979 aa18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 ACO2Q99798 780 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 GCOM2Q9BZD3 368 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 PCIF1Q9H4Z3 704 aa18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 HSPBP1Q9NZL4 362 aa18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 MAGEC2Q9UBF1 373 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-205ENST00000397406 CHD9Q3L8U1 2897 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 SLC16A3O15427 465 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 B4GALT5O43286 388 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 CSDE1O75534 798 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 AKAP3O75969 853 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 GNA14O95837 355 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 SERPINC1P01008 464 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 DARSP14868 501 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 DNAJB2P25686 324 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 CRYBB1P53674 252 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 MRPS6P82932 125 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 TRIM71Q2Q1W2 868 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 OTOP2Q7RTS6 562 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 RSPH3Q86UC2 560 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 ZBTB45Q96K62 511 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 MKNK1Q9BUB5 465 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 PBX4Q9BYU1 374 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 CELF4Q9BZC1 486 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 HAPLN2Q9GZV7 340 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 IFNKQ9P0W0 207 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 ABLIM1O14639 778 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 PROZP22891 400 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 EIF4BP23588 611 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 ZNF75DP51815 510 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 MGAT3Q09327 533 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 PRPF4BQ13523 1007 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 GRIN2CQ14957 1233 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 CEP135Q66GS9 1140 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 PSRC1Q6PGN9 363 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 TSHZ1Q6ZSZ6 1077 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 XXYLT1Q8NBI6 393 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 ZSWIM2Q8NEG5 633 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 TMEM40Q8WWA1 233 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 MYLIPQ8WY64 445 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 BORCS6Q96GS4 357 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 NAP1L5Q96NT1 182 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 TRIM5Q9C035 493 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 XPO4Q9C0E2 1151 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 GINS2Q9Y248 185 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 TRPV2Q9Y5S1 764 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 CNTNAP2Q9UHC6 1331 aa18.49■□□□□ 0.55
TSPAN4-205ENST00000397406 A0A0B4J269 797 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 A0A1B0GTH6 734 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 EXOC3O60645 756 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 TOM1L1O75674 476 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 ADCY5O95622 1261 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 FGBP02675 491 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 PSMC2P35998 433 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 COPB1P53618 953 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 UBASH3AP57075 661 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 ATF7IP2Q5U623 682 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 SLFN12LQ6IEE8 588 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 FRMD5Q7Z6J6 570 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 CREBRFQ8IUR6 639 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 ANKRD20A12PQ8NF67 263 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 POMGNT1Q8WZA1 660 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 FBXL18Q96ME1 805 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 TUBGCP2Q9BSJ2 902 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 PTPRHQ9HD43 1115 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 INTS13Q9NVM9 706 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 TAB2Q9NYJ8 693 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 NOD1Q9Y239 953 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 YBX2Q9Y2T7 364 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 CDY2AQ9Y6F7 541 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 A0A0C4DFX4 3053 aa18.48■□□□□ 0.55
TSPAN4-205ENST00000397406 M0QZ92 97 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 KIAA0391O15091 583 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 TSPAN1O60635 241 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 CHRNA1P02708 482 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 EPB41P11171 864 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 FGFR4P22455 802 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 MTIF2P46199 727 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 PCBP1Q15365 356 aaKnown RBP eCLIP18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 TRIM59Q8IWR1 403 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 FAM186BQ8IYM0 893 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 SAAL1Q96ER3 474 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 TNFSF13BQ9Y275 285 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 FRMD4BQ9Y2L6 1034 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 ANK1P16157 1881 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 UNC80Q8N2C7 3258 aa18.47■□□□□ 0.55
TSPAN4-205ENST00000397406 MAPK13O15264 365 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 CAND2O75155 1236 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 ERLIN2O94905 339 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 ARF4P18085 180 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 THPOP40225 353 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 MCL1Q07820 350 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 MAN2A1Q16706 1144 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 TCTN1Q2MV58 587 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 FAM26DQ5JW98 314 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms