RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 FAM193BQ96PV7 902 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-208ENST00000397204 SH2D3AQ9BRG2 576 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 RHOBTB2Q9BYZ6 727 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 PRKD2Q9BZL6 878 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 GBP3Q9H0R5 595 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 SFXN1Q9H9B4 322 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 UBN1Q9NPG3 1134 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 MRPL17Q9NRX2 175 aaKnown RBP9.8□□□□□ -0.84
CAPN3-208ENST00000397204 IGSF9Q9P2J2 1179 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 DNAJB4Q9UDY4 337 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 INPP5FQ9Y2H2 1132 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 CNTNAP2Q9UHC6 1331 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 FRYLO94915 3013 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 TMEM150BA6NC51 233 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 PRR23AA6NEV1 266 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 MEIS3P2A8K0S8 358 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 M0R2N6 131 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 NRP1O14786 923 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 DDHD2O94830 711 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 DEXIO95424 95 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 TDP2O95551 362 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 P4HBP07237 508 aaKnown RBP9.79□□□□□ -0.84
CAPN3-208ENST00000397204 HOXA11P31270 313 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-208ENST00000397204 RFC5P40937 340 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 CCT2P78371 535 aaKnown RBP9.79□□□□□ -0.84
CAPN3-208ENST00000397204 LETM2Q2VYF4 491 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 ELMSAN1Q6PJG2 1045 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 BRICD5Q6PL45 260 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 OTUD6AQ7L8S5 288 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 ASCL5Q7RTU5 278 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 DAGLBQ8NCG7 672 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 NKD2Q969F2 451 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-208ENST00000397204 ZNF274Q96GC6 653 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-208ENST00000397204 NLRP4Q96MN2 994 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 RTP3Q9BQQ7 232 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 VN1R3Q9BXE9 311 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 SMOC2Q9H3U7 446 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 RSAD1Q9HA92 442 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 KCNK12Q9HB15 430 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 NCOA5Q9HCD5 579 aaKnown RBP9.79□□□□□ -0.84
CAPN3-208ENST00000397204 AGPAT5Q9NUQ2 364 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 COL4A3BPQ9Y5P4 624 aa9.79□□□□□ -0.84
CAPN3-208ENST00000397204 CPLX1O14810 134 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 GAS2O43903 313 aaKnown RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 SRGAP2CP0DJJ0 459 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 NPR3P17342 541 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 NCLP19338 710 aaKnown RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 AOC1P19801 751 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 NPEPPSP55786 919 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 NCBP1Q09161 790 aaKnown RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 PPP2R5CQ13362 524 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 NONOQ15233 471 aaKnown RBP eCLIP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 PCBP1Q15365 356 aaKnown RBP eCLIP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 PPP4R3AQ6IN85 833 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 CPLX2Q6PUV4 134 aaKnown RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 RUFY3Q7L099 469 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 KRT25Q7Z3Z0 450 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 GPR65Q8IYL9 337 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 FAM160A2Q8N612 972 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 FLCNQ8NFG4 579 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 HDAC7Q8WUI4 952 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 TCP11Q8WWU5 503 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 PSPC1Q8WXF1 523 aaKnown RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 NXPE3Q969Y0 559 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 CEP170P1Q96L14 293 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 RPS6KC1Q96S38 1066 aa9.78□□□□□ -0.84
CAPN3-208ENST00000397204 SLKQ9H2G2 1235 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 DDX25Q9UHL0 483 aaKnown RBP9.78□□□□□ -0.84
CAPN3-208ENST00000397204 CACNA1AO00555 2505 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 CCDC195A0A1B0GUA6 201 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 EML1O00423 815 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 TBX3O15119 743 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 EPB41L2O43491 1005 aaKnown RBP9.77□□□□□ -0.85
CAPN3-208ENST00000397204 PI15O43692 258 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 B4GALT3O60512 393 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 REC8O95072 547 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 SOD2P04179 222 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 URODP06132 367 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 ADH1AP07327 375 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 ITGA4P13612 1032 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 GCFC2P16383 781 aaKnown RBP9.77□□□□□ -0.85
CAPN3-208ENST00000397204 AXLP30530 894 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 AFF1P51825 1210 aaKnown RBP9.77□□□□□ -0.85
CAPN3-208ENST00000397204 POU5F1BQ06416 359 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 LAMTOR4Q0VGL1 99 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 EPHA7Q15375 998 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 INF2Q27J81 1249 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 KIAA0319Q5VV43 1072 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 FRMD5Q7Z6J6 570 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 SKAP1Q86WV1 359 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 C4orf19Q8IY42 314 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 CCDC105Q8IYK2 499 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 STAMQ92783 540 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 CCDC51Q96ER9 411 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 NAP1L4Q99733 375 aaKnown RBP9.77□□□□□ -0.85
CAPN3-208ENST00000397204 PLEKHA4Q9H4M7 779 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 MINDY3Q9H8M7 445 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms