RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ALCAMQ13740 583 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 NCAPHQ15003 741 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 SMAD2Q15796 467 aaKnown RBP14.52□□□□□ -0.08
SEC13-209ENST00000397117 ZNF720Q7Z2F6 126 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 NELFCDQ8IXH7 590 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 SCFD1Q8WVM8 642 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 LMBR1Q8WVP7 490 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 TCP11Q8WWU5 503 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 CLP1Q92989 425 aaKnown RBP14.52□□□□□ -0.08
SEC13-209ENST00000397117 TMEM143Q96AN5 459 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 FBXL18Q96ME1 805 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 FGFBP2Q9BYJ0 223 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 RC3H2Q9HBD1 1191 aaKnown RBP14.52□□□□□ -0.08
SEC13-209ENST00000397117 COL1A2P08123 1366 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 UBE4BO95155 1302 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 ENPP3O14638 875 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 MAGEB2O15479 319 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 DNM2P50570 870 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 CASP5P51878 434 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 DLX2Q07687 328 aaPredicted RBP14.52□□□□□ -0.09
SEC13-209ENST00000397117 PPP2R5AQ15172 486 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 CENPPQ6IPU0 288 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 EPM2AIP1Q7L775 607 aaPredicted RBP14.52□□□□□ -0.09
SEC13-209ENST00000397117 METTL13Q8N6R0 699 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 TRAPPC12Q8WVT3 735 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 MED15Q96RN5 788 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 KMT5AQ9NQR1 393 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 FANCLQ9NW38 375 aa14.52□□□□□ -0.09
SEC13-209ENST00000397117 NRCAMQ92823 1304 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 ARID2Q68CP9 1835 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 TRIOO75962 3097 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 TRIM49BA6NDI0 452 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 RRN3P2A6NIE6 340 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 H0YCG3 227 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 MBTPS2O43462 519 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 PRPF6O94906 941 aaKnown RBP14.51□□□□□ -0.09
SEC13-209ENST00000397117 CDK11BP21127 795 aaKnown RBP14.51□□□□□ -0.09
SEC13-209ENST00000397117 NPTX2P47972 431 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 LRRC63Q05C16 580 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 MGAT3Q09327 533 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 GRIK4Q16099 956 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 KNOP1Q1ED39 458 aaKnown RBP14.51□□□□□ -0.09
SEC13-209ENST00000397117 BMT2Q1RMZ1 405 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 IER5Q5VY09 327 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 ANKRD40Q6AI12 368 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 RUFY4Q6ZNE9 571 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 CSGALNACT2Q8N6G5 542 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 ZNF507Q8TCN5 953 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 SPIRE2Q8WWL2 714 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 ZNF689Q96CS4 500 aaPredicted RBP14.51□□□□□ -0.09
SEC13-209ENST00000397117 FIZ1Q96SL8 496 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 C11orf84Q9BUA3 381 aaPredicted RBP14.51□□□□□ -0.09
SEC13-209ENST00000397117 RWDD3Q9Y3V2 267 aa14.51□□□□□ -0.09
SEC13-209ENST00000397117 SLC16A4O15374 487 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 FGFR1OPO95684 399 aaKnown RBP14.5□□□□□ -0.09
SEC13-209ENST00000397117 GHRP10912 638 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 TMOD1P28289 359 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 ABCD1P33897 745 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 ARL2P36404 184 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 PMS1P54277 932 aaKnown RBP14.5□□□□□ -0.09
SEC13-209ENST00000397117 NCKAP1LP55160 1127 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 CAMK1Q14012 370 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 MXD4Q14582 209 aaPredicted RBP14.5□□□□□ -0.09
SEC13-209ENST00000397117 LPIN1Q14693 890 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 ZC2HC1CQ53FD0 456 aaPredicted RBP14.5□□□□□ -0.09
SEC13-209ENST00000397117 EFCAB12Q6NXP0 572 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 TTI2Q6NXR4 508 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 HFE2Q6ZVN8 426 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 HAUS6Q7Z4H7 955 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 NOC3LQ8WTT2 800 aaKnown RBP14.5□□□□□ -0.09
SEC13-209ENST00000397117 PSPC1Q8WXF1 523 aaKnown RBP14.5□□□□□ -0.09
SEC13-209ENST00000397117 C5orf42Q9H799 3197 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 ADGRA3Q8IWK6 1321 aa14.5□□□□□ -0.09
SEC13-209ENST00000397117 KIAA1671Q9BY89 1806 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 IGKV6-21A0A0C4DH24 114 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 CALUO43852 315 aaPredicted RBP14.49□□□□□ -0.09
SEC13-209ENST00000397117 C22orf31O95567 290 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 GLRA2P23416 452 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 KLRC1P26715 233 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 NAMPTP43490 491 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 ADAM15Q13444 863 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 CLUL1Q15846 466 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 SYCP3Q8IZU3 236 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 LRRC71Q8N4P6 559 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 DEPTORQ8TB45 409 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 PRPF31Q8WWY3 499 aaKnown RBP14.49□□□□□ -0.09
SEC13-209ENST00000397117 BSNDQ8WZ55 320 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 ACCSQ96QU6 501 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 NTPCRQ9BSD7 190 aaKnown RBP14.49□□□□□ -0.09
SEC13-209ENST00000397117 ST6GALNAC4Q9H4F1 302 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 TMEM206Q9H813 350 aa14.49□□□□□ -0.09
SEC13-209ENST00000397117 SAMSN1Q9NSI8 373 aaKnown RBP14.49□□□□□ -0.09
SEC13-209ENST00000397117 SUCLA2Q9P2R7 463 aaPredicted RBP14.49□□□□□ -0.09
SEC13-209ENST00000397117 LRRIQ4A6NIV6 560 aa14.48□□□□□ -0.09
SEC13-209ENST00000397117 SCP2P22307 547 aa14.48□□□□□ -0.09
SEC13-209ENST00000397117 GTF2F1P35269 517 aaKnown RBP eCLIP14.48□□□□□ -0.09
SEC13-209ENST00000397117 SMAD4Q13485 552 aaKnown RBP14.48□□□□□ -0.09
SEC13-209ENST00000397117 HSP90AA4PQ58FG1 418 aa14.48□□□□□ -0.09
SEC13-209ENST00000397117 TAF2Q6P1X5 1199 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms