RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 GYPCP04921 128 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 ADRB2P07550 413 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 FMO5P49326 533 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 MAPK8IP2Q13387 824 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-209ENST00000397036 NOLC1Q14978 699 aaKnown RBP eCLIP14.8□□□□□ -0.04
MCF2L-209ENST00000397036 SNX17Q15036 470 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 SURF1Q15526 300 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 C1orf220Q5T0J3 134 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 TCERG1LQ5VWI1 586 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 GBP6Q6ZN66 633 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 FAM43BQ6ZT52 329 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-209ENST00000397036 APBB1IPQ7Z5R6 666 aaPredicted RBP14.8□□□□□ -0.04
MCF2L-209ENST00000397036 CNGA4Q8IV77 575 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 RDH13Q8NBN7 331 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 SAAL1Q96ER3 474 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 SCLT1Q96NL6 688 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 PANX2Q96RD6 677 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 FAM213AQ9BRX8 229 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 TCHPQ9BT92 498 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 FBXL5Q9UKA1 691 aa14.8□□□□□ -0.04
MCF2L-209ENST00000397036 A0A0U1RQG5 324 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-209ENST00000397036 GOLGA8IPA6NC78 632 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 GOLGA8JA6NMD2 632 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 TSPAN1O60635 241 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 ERLIN2O94905 339 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 CCL5P13501 91 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 ARF4P18085 180 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-209ENST00000397036 MRPS6P82932 125 aaKnown RBP14.79□□□□□ -0.04
MCF2L-209ENST00000397036 RBL2Q08999 1139 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 CETN1Q12798 172 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 EXOC3L4Q17RC7 722 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 DCAF17Q5H9S7 520 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-209ENST00000397036 BRSK2Q8IWQ3 736 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 TC2NQ8N9U0 490 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 CCDC112Q8NEF3 446 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 ZSWIM2Q8NEG5 633 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 CACTINQ8WUQ7 758 aaKnown RBP14.79□□□□□ -0.04
MCF2L-209ENST00000397036 ARMC5Q96C12 935 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 TMX1Q9H3N1 280 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 CDHR5Q9HBB8 845 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 CPSF3Q9UKF6 684 aaKnown RBP14.79□□□□□ -0.04
MCF2L-209ENST00000397036 COQ4Q9Y3A0 265 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 SQORQ9Y6N5 450 aa14.79□□□□□ -0.04
MCF2L-209ENST00000397036 A0A1W2PQ45 241 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-209ENST00000397036 A0A1W2PQY0 241 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 M0QZ92 97 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 B4GALT5O43286 388 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 FECHP22830 423 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 HOXA11P31270 313 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-209ENST00000397036 CTCFP49711 727 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-209ENST00000397036 CDK7P50613 346 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 AP3M2P53677 418 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 ZBED6P86452 979 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 PTGISQ16647 500 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 FAM47CQ5HY64 1035 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 FAM26DQ5JW98 314 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 SMYD5Q6GMV2 418 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 DPY19L2P1Q6NXN4 242 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 PLEKHO2Q8TD55 490 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 VTI1AQ96AJ9 217 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 ZNF668Q96K58 619 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-209ENST00000397036 CRISPLD2Q9H0B8 497 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 PDZD7Q9H5P4 517 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 STARD7Q9NQZ5 370 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 ANKFY1Q9P2R3 1169 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 LUC7L2Q9Y383 392 aaKnown RBP14.78□□□□□ -0.04
MCF2L-209ENST00000397036 TRPV2Q9Y5S1 764 aa14.78□□□□□ -0.04
MCF2L-209ENST00000397036 TTC26A0AVF1 554 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 ARVCFO00192 962 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 NRDCO43847 1150 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 MFAP3LO75121 409 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 CLTAP09496 248 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 TRIM21P19474 475 aaKnown RBP14.77□□□□□ -0.04
MCF2L-209ENST00000397036 MGAT3Q09327 533 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 MTFR1Q15390 333 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 TRIM71Q2Q1W2 868 aaKnown RBP14.77□□□□□ -0.04
MCF2L-209ENST00000397036 DCAF4L1Q3SXM0 396 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 ZNF568Q3ZCX4 644 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 EEF1DP3Q658K8 133 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 CATSPER4Q7RTX7 472 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 ZNF397Q8NF99 534 aaPredicted RBP14.77□□□□□ -0.04
MCF2L-209ENST00000397036 OR8K1Q8NGG5 319 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 PPP1R13LQ8WUF5 828 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 ZNF333Q96JL9 665 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 OSMRQ99650 979 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 ADPGKQ9BRR6 497 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 NAA15Q9BXJ9 866 aaKnown RBP14.77□□□□□ -0.04
MCF2L-209ENST00000397036 RNF208Q9H0X6 261 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 NUCKS1Q9H1E3 243 aaKnown RBP14.77□□□□□ -0.04
MCF2L-209ENST00000397036 CDT1Q9H211 546 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 MMRN2Q9H8L6 949 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 TMEM8AQ9HCN3 771 aa14.77□□□□□ -0.04
MCF2L-209ENST00000397036 TRIP12Q14669 1992 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-209ENST00000397036 LRRIQ3A6PVS8 624 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 PON1P27169 355 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 HNRNPH3P31942 346 aaKnown RBP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 CASP14P31944 242 aa14.76□□□□□ -0.05
MCF2L-209ENST00000397036 MATR3P43243 847 aaKnown RBP eCLIP14.76□□□□□ -0.05
MCF2L-209ENST00000397036 ACOT2P49753 483 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms