RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 MRPL4Q9BYD3 311 aaKnown RBP11.64□□□□□ -0.55
NUP98-205ENST00000397007 AGPAT3Q9NRZ7 376 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 FAM105AQ9NUU6 356 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 IPPQ9Y573 584 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 TTC26A0AVF1 554 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 N4BP3O15049 544 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 RAB27AP51159 221 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 DCAF4L1Q3SXM0 396 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 TMEM192Q8IY95 271 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 MYCT1Q8N699 235 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 SEPT8Q92599 483 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 CPB2Q96IY4 423 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 SNX27Q96L92 541 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 IFT74Q96LB3 600 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 ZMYND8Q9ULU4 1186 aaPredicted RBP11.63□□□□□ -0.55
NUP98-205ENST00000397007 OFD1O75665 1012 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 FAM13AO94988 1023 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 ASIC1P78348 528 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 MAPK6Q16659 721 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 ZBTB41Q5SVQ8 909 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 CCDC183Q5T5S1 534 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 ATF7IP2Q5U623 682 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 NOTUMQ6P988 496 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 MAEAQ7L5Y9 396 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 ERCC4Q92889 916 aaPredicted RBP11.63□□□□□ -0.55
NUP98-205ENST00000397007 VTI1AQ96AJ9 217 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 ZBTB45Q96K62 511 aaPredicted RBP11.63□□□□□ -0.55
NUP98-205ENST00000397007 SLC9A7Q96T83 725 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 MYCNP04198 464 aaPredicted RBP11.63□□□□□ -0.55
NUP98-205ENST00000397007 TMEM206Q9H813 350 aa11.63□□□□□ -0.55
NUP98-205ENST00000397007 TYW1Q9NV66 732 aaKnown RBP11.63□□□□□ -0.55
NUP98-205ENST00000397007 K7ENM7 598 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 KIAA0391O15091 583 aaKnown RBP11.62□□□□□ -0.55
NUP98-205ENST00000397007 PMM2O15305 246 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 TARS2Q9BW92 718 aaKnown RBP11.62□□□□□ -0.55
NUP98-205ENST00000397007 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 RMND1Q9NWS8 449 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 PRUNE2Q8WUY3 3088 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 GJB5O95377 273 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 NLRP12P59046 1061 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 PRPF4BQ13523 1007 aaKnown RBP11.62□□□□□ -0.55
NUP98-205ENST00000397007 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
NUP98-205ENST00000397007 ZBTB8OSQ8IWT0 167 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 ACCSQ96QU6 501 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 LRRIQ4A6NIV6 560 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 K7ERI5 159 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 AARSP49588 968 aaKnown RBP eCLIP11.62□□□□□ -0.554e-6■■□□□ 13.1
NUP98-205ENST00000397007 AFF1P51825 1210 aaKnown RBP11.62□□□□□ -0.55
NUP98-205ENST00000397007 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 PRPF38BQ5VTL8 546 aaKnown RBP11.62□□□□□ -0.55
NUP98-205ENST00000397007 DEPTORQ8TB45 409 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 DHTKD1Q96HY7 919 aaPredicted RBP11.62□□□□□ -0.55
NUP98-205ENST00000397007 ZNF668Q96K58 619 aaPredicted RBP11.62□□□□□ -0.55
NUP98-205ENST00000397007 SLC39A2Q9NP94 309 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 PCDHB2Q9Y5E7 798 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
NUP98-205ENST00000397007 PTPRJQ12913 1337 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 KINO60870 393 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 TBCAO75347 108 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 PRPF6O94906 941 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 ACRP10323 421 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 SMTNP53814 917 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 SMAD3P84022 425 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 ENOX2Q16206 610 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 FAM109BQ6ICB4 259 aaPredicted RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 ZMAT2Q96NC0 199 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 MRPL44Q9H9J2 332 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 MIOSQ9NXC5 875 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 DERAQ9Y315 318 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 FGBP02675 491 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 DPCR1Q3MIW9 517 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 GPR153Q6NV75 609 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 CMTR2Q8IYT2 770 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 TDHQ8IZJ6 230 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 ADAM2Q99965 735 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 CBWD1Q9BRT8 395 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 NUP62CLQ9H1M0 184 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 NXF3Q9H4D5 531 aaKnown RBP11.61□□□□□ -0.55
NUP98-205ENST00000397007 PLEKHA5Q9HAU0 1116 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 GIT1Q9Y2X7 761 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 M0QZ92 97 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 IKBKEQ14164 716 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 CDKAL1Q5VV42 579 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 PPP1R16BQ96T49 567 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 NOD1Q9Y239 953 aa11.61□□□□□ -0.55
NUP98-205ENST00000397007 ANO9A1A5B4 782 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 TMEM189-UBE2V1I3L0A0 370 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 SKIP12755 728 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 ZNF18P17022 549 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 PPP1R2P41236 205 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 NOLC1Q14978 699 aaKnown RBP eCLIP11.6□□□□□ -0.55
NUP98-205ENST00000397007 ANKRD40Q6AI12 368 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 SCARA3Q6AZY7 606 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 SMYD5Q6GMV2 418 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 TRMT1LQ7Z2T5 733 aaKnown RBP11.6□□□□□ -0.55
NUP98-205ENST00000397007 HERC6Q8IVU3 1022 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 SMARCE1Q969G3 411 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 RWDD2AQ9UIY3 292 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms