RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.98□□□□□ -0.01
NUP98-204ENST00000397004 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.98□□□□□ -0.01
NUP98-204ENST00000397004 GRIN3BO60391 1043 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 TCEAL1Q15170 157 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 FITM2Q8N6M3 262 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 DONSONQ9NYP3 566 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 TCP11X1B4DZS4 312 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 RASGRF2O14827 1237 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 GAP43P17677 238 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 ECE1P42892 770 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 ALDH5A1P51649 535 aaPredicted RBP14.97□□□□□ -0.01
NUP98-204ENST00000397004 ICA1Q05084 483 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 EP400NLQ6ZTU2 488 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 ANKS1BQ7Z6G8 1248 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 CCDC25Q86WR0 208 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 EBF2Q9HAK2 575 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 CLDN3O15551 220 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 KRT16P08779 473 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 DLATP10515 647 aaKnown RBP14.97□□□□□ -0.01
NUP98-204ENST00000397004 RDXP35241 583 aaKnown RBP14.97□□□□□ -0.01
NUP98-204ENST00000397004 FMO1Q01740 532 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 PPP2R5CQ13362 524 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 SLC27A3Q5K4L6 730 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 C6orf118Q5T5N4 469 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 MFSD5Q6N075 450 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 SLC5A5Q92911 643 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 L3MBTL3Q96JM7 780 aaPredicted RBP14.97□□□□□ -0.01
NUP98-204ENST00000397004 SCN9AQ15858 1988 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 SYNGAP1Q96PV0 1343 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 GOLGA6L10A0A0M3HER8 536 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 TMEM120BA0PK00 339 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 CYP26A1O43174 497 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 HIP1RO75146 1068 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 RTN2O75298 545 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 CRKP46108 304 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 GPC5P78333 572 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 ZNF268Q14587 947 aaPredicted RBP14.97□□□□□ -0.01
NUP98-204ENST00000397004 LRCH2Q5VUJ6 765 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 PNMA8AQ86V59 439 aaPredicted RBP14.97□□□□□ -0.01
NUP98-204ENST00000397004 COA1Q9GZY4 146 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 CCDC113Q9H0I3 377 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 GLT8D2Q9H1C3 349 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 PRR12Q9ULL5 1215 aa14.97□□□□□ -0.01
NUP98-204ENST00000397004 EXOC3O60645 756 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 PPP2R5AQ15172 486 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 CCDC63Q8NA47 563 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 P3H4Q92791 437 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 KLRG2A4D1S0 409 aaPredicted RBP14.96□□□□□ -0.01
NUP98-204ENST00000397004 ADCY2Q08462 1091 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 SNX1Q13596 522 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 MSL1Q68DK7 614 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 RHOT2Q8IXI1 618 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 FAXDC2Q96IV6 333 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 FAM118BQ9BPY3 351 aa14.96□□□□□ -0.01
NUP98-204ENST00000397004 R3HDM2Q9Y2K5 976 aaKnown RBP14.96□□□□□ -0.01
NUP98-204ENST00000397004 ALADP13716 330 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 ADCY1Q08828 1119 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 TRIP13Q15645 432 aaPredicted RBP14.96□□□□□ -0.02
NUP98-204ENST00000397004 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 KIAA0825Q8IV33 1275 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 THOC1Q96FV9 657 aaKnown RBP14.96□□□□□ -0.02
NUP98-204ENST00000397004 CCDC17Q96LX7 622 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 ATP6V0A4Q9HBG4 840 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 TUFT1Q9NNX1 390 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 PRKAG3Q9UGI9 489 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 FRMD4BQ9Y2L6 1034 aa14.96□□□□□ -0.02
NUP98-204ENST00000397004 ANKRD31Q8N7Z5 1873 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 HGSO14964 777 aaPredicted RBP14.95□□□□□ -0.02
NUP98-204ENST00000397004 ADRB2P07550 413 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 PAX7P23759 505 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 SPP2Q13103 211 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 C2CD6Q53TS8 623 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 MIGA2Q7L4E1 593 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 CCDC105Q8IYK2 499 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 DHX38Q92620 1227 aaKnown RBP14.95□□□□□ -0.02
NUP98-204ENST00000397004 UTP4Q969X6 686 aaKnown RBP14.95□□□□□ -0.02
NUP98-204ENST00000397004 ZNF570Q96NI8 536 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 NAP1L3Q99457 506 aaPredicted RBP14.95□□□□□ -0.02
NUP98-204ENST00000397004 TMEM117Q9H0C3 514 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 PIK3CDO00329 1044 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 POLRMTO00411 1230 aaKnown RBP14.95□□□□□ -0.02
NUP98-204ENST00000397004 HLA-DOAP06340 250 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 GSTA1P08263 222 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 SLC9A9Q8IVB4 645 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 FAM71AQ8IYT1 594 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 NSMCE1Q8WV22 266 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 GMCL1Q96IK5 515 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 RPS6KC1Q96S38 1066 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 NUP85Q9BW27 656 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 DBNDD1Q9H9R9 158 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 IGF2BP3O00425 579 aaKnown RBP eCLIP14.95□□□□□ -0.02
NUP98-204ENST00000397004 PPEF1O14829 653 aaPredicted RBP14.95□□□□□ -0.02
NUP98-204ENST00000397004 MTA2O94776 668 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 CFBP00751 764 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 ZNF76P36508 570 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 BNIP1Q12981 228 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 KYNUQ16719 465 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 BTNL9Q6UXG8 535 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 RPAINQ86UA6 219 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 GIMAP7Q8NHV1 300 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms