RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 PRKCBP05771 671 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 CRYBB1P53674 252 aaPredicted RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 GNG11P61952 73 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 RBL2Q08999 1139 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 MGAT3Q09327 533 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 PCBP1Q15365 356 aaKnown RBP eCLIP16.18■□□□□ 0.189e-6■■■■■ 29.7
TM9SF1-202ENST00000396854 HS2ST1Q7LGA3 356 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 ANKRD33Q7Z3H0 272 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 SCLT1Q96NL6 688 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 WDR24Q96S15 920 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 CARD6Q9BX69 1037 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 CELF4Q9BZC1 486 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 C11orf49Q9H6J7 331 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 PRMT7Q9NVM4 692 aaPredicted RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 ARGLU1Q9NWB6 273 aaPredicted RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 LIMA1Q9UHB6 759 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 TRPV2Q9Y5S1 764 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 INO80B-WBP1J3KQ70 363 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 M0QZ92 97 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 ACKR2O00590 384 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 EDN1P05305 212 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 IQCF3P0C7M6 154 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 DARSP14868 501 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 ZPBP2Q6X784 338 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 C12orf56Q8IXR9 622 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 TOX2Q96NM4 488 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 OSMRQ99650 979 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 INO80BQ9C086 356 aaPredicted RBP16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 IKZF4Q9H2S9 585 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 THAP9Q9H5L6 903 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 CDHR5Q9HBB8 845 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 AGPAT3Q9NRZ7 376 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 MRFAP1Q9Y605 127 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 CDY2AQ9Y6F7 541 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 ITIH6Q6UXX5 1313 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 CCDC175P0C221 793 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 EIF4BP23588 611 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 THPOP40225 353 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 FKBP3Q00688 224 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 AMHR2Q16671 573 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 FAM26DQ5JW98 314 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 SLC39A4Q6P5W5 647 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 PAWRQ96IZ0 340 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 MRPL4Q9BYD3 311 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 FHOD1Q9Y613 1164 aa16.17■□□□□ 0.18
TM9SF1-202ENST00000396854 HNRNPDLO14979 420 aaKnown RBP16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 ZRANB2O95218 330 aaKnown RBP eCLIP16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 MYBPC2Q14324 1141 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 FILIP1LQ4L180 1135 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 LRRC55Q6ZSA7 311 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 NECAB2Q7Z6G3 386 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 SLC9A9Q8IVB4 645 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 CSGALNACT2Q8N6G5 542 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 CAGE1Q8TC20 777 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 TMEM40Q8WWA1 233 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 GINS2Q9Y248 185 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 CNTNAP2Q9UHC6 1331 aa16.16■□□□□ 0.18
TM9SF1-202ENST00000396854 TLR3O15455 904 aaKnown RBP16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 CHRNA1P02708 482 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 NR3C1P04150 777 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 FECHP22830 423 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 LIG4P49917 911 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 ATN1P54259 1190 aaPredicted RBP16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 CCDC51Q96ER9 411 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 BICD1Q96G01 975 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 DESI2Q9BSY9 194 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 TARS2Q9BW92 718 aaKnown RBP16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 STYXL1Q9Y6J8 313 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 LRRC10BA6NIK2 292 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 SOWAHDA6NJG2 315 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 ANKRD63C9JTQ0 380 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 MFAP3LO75121 409 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 FGFR1OPO95684 399 aaKnown RBP16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 CKBP12277 381 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 NR2F2P24468 414 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 RPL13P26373 211 aaKnown RBP16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 EEF1GP26641 437 aaKnown RBP16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 PRPF4BQ13523 1007 aaKnown RBP16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 UBE2Q1Q7Z7E8 422 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 ANKRD20A12PQ8NF67 263 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 CEP63Q96MT8 703 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 ACO2Q99798 780 aaKnown RBP16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 DMAC2Q9NW81 257 aa16.15■□□□□ 0.18
TM9SF1-202ENST00000396854 KCNJ18B7U540 433 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 TISP43B9A030 160 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 CLIC2O15247 247 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 PQBP1O60828 265 aaKnown RBP16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 CTSHP09668 335 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 GARTP22102 1010 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 ADSSP30520 456 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 FAM193AP78312 1265 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 KCNJ12Q14500 433 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 MTF1Q14872 753 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 KRT31Q15323 416 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 TERF2Q15554 542 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
TM9SF1-202ENST00000396854 TSHZ1Q6ZSZ6 1077 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms