RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 TYW1Q9NV66 732 aaKnown RBP23.29■■□□□ 1.32
FXN-202ENST00000396364 TTLL13PA6NNM8 815 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 PDXKO00764 312 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 ATP2A2P16615 1042 aaKnown RBP23.28■■□□□ 1.32
FXN-202ENST00000396364 YARSP54577 528 aaKnown RBP23.28■■□□□ 1.32
FXN-202ENST00000396364 KCNA1Q09470 495 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 C9orf50Q5SZB4 431 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 UBXN11Q5T124 520 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 RASIP1Q5U651 963 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 ISM2Q6H9L7 571 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 RBM43Q6ZSC3 357 aaKnown RBP23.28■■□□□ 1.32
FXN-202ENST00000396364 ZBTB33Q86T24 672 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 CDR2LQ86X02 465 aaPredicted RBP23.28■■□□□ 1.32
FXN-202ENST00000396364 MLKLQ8NB16 471 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 RNF169Q8NCN4 708 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 CDT1Q9H211 546 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 TOPORSQ9NS56 1045 aaPredicted RBP23.28■■□□□ 1.32
FXN-202ENST00000396364 USP20Q9Y2K6 914 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 IPPQ9Y573 584 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 STYXL1Q9Y6J8 313 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 TTC3P53804 2025 aa23.28■■□□□ 1.32
FXN-202ENST00000396364 HARSP12081 509 aaKnown RBP23.27■■□□□ 1.32
FXN-202ENST00000396364 EEF1DP3Q658K8 133 aa23.27■■□□□ 1.32
FXN-202ENST00000396364 MRPL10Q7Z7H8 261 aaKnown RBP23.27■■□□□ 1.32
FXN-202ENST00000396364 DHTKD1Q96HY7 919 aaPredicted RBP23.27■■□□□ 1.32
FXN-202ENST00000396364 EIF2AQ9BY44 585 aaKnown RBP23.27■■□□□ 1.32
FXN-202ENST00000396364 CXXC1Q9P0U4 656 aaPredicted RBP23.27■■□□□ 1.32
FXN-202ENST00000396364 TMEM63CQ9P1W3 806 aa23.27■■□□□ 1.32
FXN-202ENST00000396364 AGO2Q9UKV8 859 aaKnown RBP23.27■■□□□ 1.32
FXN-202ENST00000396364 MAPK8IP1Q9UQF2 711 aa23.27■■□□□ 1.32
FXN-202ENST00000396364 ZMYM2Q9UBW7 1377 aa23.27■■□□□ 1.31
FXN-202ENST00000396364 A0A0B4J269 797 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 BICDL2A1A5D9 508 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 OGTO15294 1046 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 UPP2O95045 317 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 RPL13P26373 211 aaKnown RBP23.26■■□□□ 1.31
FXN-202ENST00000396364 GRM5P41594 1212 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 PRCPP42785 496 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 DEFB103AP81534 67 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 GLB1LQ6UWU2 654 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 SMYD4Q8IYR2 804 aaPredicted RBP23.26■■□□□ 1.31
FXN-202ENST00000396364 ADSSL1Q8N142 457 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 KIAA1586Q9HCI6 787 aa23.26■■□□□ 1.31
FXN-202ENST00000396364 ANKRD63C9JTQ0 380 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 NLRP12P59046 1061 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 HERC6Q8IVU3 1022 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 C12orf56Q8IXR9 622 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 THNSL1Q8IYQ7 743 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 ZBTB45Q96K62 511 aaPredicted RBP23.25■■□□□ 1.31
FXN-202ENST00000396364 ACAP3Q96P50 834 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 RSAD1Q9HA92 442 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 AGPAT3Q9NRZ7 376 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 PARP2Q9UGN5 583 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 TRAF3IP3Q9Y228 551 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 GIT1Q9Y2X7 761 aa23.25■■□□□ 1.31
FXN-202ENST00000396364 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.24■■□□□ 1.31
FXN-202ENST00000396364 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.24■■□□□ 1.31
FXN-202ENST00000396364 ABLIM1O14639 778 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 GJB5O95377 273 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 CLTAP09496 248 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 HOXD13P35453 343 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 POU5F1Q01860 360 aaKnown RBP23.24■■□□□ 1.31
FXN-202ENST00000396364 LRRC63Q05C16 580 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 MYBPC2Q14324 1141 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 CT47A1Q5JQC4 288 aaPredicted RBP23.24■■□□□ 1.31
FXN-202ENST00000396364 SLC39A4Q6P5W5 647 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 ZNF598Q86UK7 904 aaKnown RBP23.24■■□□□ 1.31
FXN-202ENST00000396364 SMG8Q8ND04 991 aaKnown RBP23.24■■□□□ 1.31
FXN-202ENST00000396364 URGCPQ8TCY9 931 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 RPS6KC1Q96S38 1066 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 YME1L1Q96TA2 773 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 APOL6Q9BWW8 343 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 MRPL9Q9BYD2 267 aaKnown RBP23.24■■□□□ 1.31
FXN-202ENST00000396364 KCTD10Q9H3F6 313 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 NXF3Q9H4D5 531 aaKnown RBP23.24■■□□□ 1.31
FXN-202ENST00000396364 KANSL3Q9P2N6 904 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 INSL6Q9Y581 213 aa23.24■■□□□ 1.31
FXN-202ENST00000396364 TGFB1I1O43294 461 aa23.23■■□□□ 1.31
FXN-202ENST00000396364 EDRF1Q3B7T1 1238 aa23.23■■□□□ 1.31
FXN-202ENST00000396364 TMEM117Q9H0C3 514 aa23.23■■□□□ 1.31
FXN-202ENST00000396364 ANO10Q9NW15 660 aa23.23■■□□□ 1.31
FXN-202ENST00000396364 SNTG2Q9NY99 539 aa23.23■■□□□ 1.31
FXN-202ENST00000396364 TLL1O43897 1013 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 DGKIO75912 1065 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 CCNE1P24864 410 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 PAK1Q13153 545 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 STX1AQ16623 288 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 NFIL3Q16649 462 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 CENPPQ6IPU0 288 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 FAM117BQ6P1L5 589 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 CD302Q8IX05 232 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 GPD1LQ8N335 351 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 XXYLT1Q8NBI6 393 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 TMEM174Q8WUU8 243 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 P2RX5Q93086 422 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 RAD9AQ99638 391 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 PRO3102Q9H379 93 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 RPF1Q9H9Y2 349 aaKnown RBP23.22■■□□□ 1.31
FXN-202ENST00000396364 HSPBP1Q9NZL4 362 aa23.22■■□□□ 1.31
FXN-202ENST00000396364 HES2Q9Y543 173 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms