RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 RARGP13631 454 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 FMO1Q01740 532 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 ALCAMQ13740 583 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 CCDC197Q8NCU1 140 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 NCAPGQ9BPX3 1015 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 PTPN22Q9Y2R2 807 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 PMM2O15305 246 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 TP73O15350 636 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 C12orf50Q8NA57 414 aaPredicted RBP16.88■□□□□ 0.29
HOXA3-202ENST00000396352 ZNF564Q8TBZ8 553 aaPredicted RBP16.88■□□□□ 0.29
HOXA3-202ENST00000396352 NUP85Q9BW27 656 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 HERC5Q9UII4 1024 aaKnown RBP16.88■□□□□ 0.29
HOXA3-202ENST00000396352 CYP26A1O43174 497 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 DNAJC8O75937 253 aaPredicted RBP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 ADRB2P07550 413 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 PLS3P13797 630 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 MXI1P50539 228 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 AUHQ13825 339 aaKnown RBP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 RASA3Q14644 834 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 SLMAPQ14BN4 828 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 CYFIP1Q7L576 1253 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 LRRC34Q8IZ02 419 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 SGSM3Q96HU1 749 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 PRMT1Q99873 361 aaKnown RBP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 ZHX2Q9Y6X8 837 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 CCT8L1PA6NM43 557 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 MAPK13O15264 365 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 DHX15O43143 795 aaKnown RBP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 PPIP5K2O43314 1243 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 ATP2C2O75185 946 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 SLCO1A2P46721 670 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 KCNJ1P48048 391 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 RARRES1P49788 294 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 MCCD1P59942 119 aaPredicted RBP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 MIER3Q7Z3K6 550 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 FAM228AQ86W67 206 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 PARP9Q8IXQ6 854 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 CCDC105Q8IYK2 499 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 NLGN1Q8N2Q7 840 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 SHC3Q92529 594 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 SEMA4DQ92854 862 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 PKD2L1Q9P0L9 805 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 GTF2BQ00403 316 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 CC2D2BQ6DHV5 1058 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 CROCCP2Q86T23 111 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 TAX1BP1Q86VP1 789 aa16.87■□□□□ 0.29
HOXA3-202ENST00000396352 ZNF622Q969S3 477 aaKnown RBP eCLIP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 INTS9Q9NV88 658 aaKnown RBP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 DBR1Q9UK59 544 aaKnown RBP16.87■□□□□ 0.29
HOXA3-202ENST00000396352 P4HBP07237 508 aaKnown RBP16.86■□□□□ 0.29
HOXA3-202ENST00000396352 ITIH4Q14624 930 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 MFSD5Q6N075 450 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 LDHDQ86WU2 507 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 KCNH7Q9NS40 1196 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 MTUS1Q9ULD2 1270 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 CHURC1Q8WUH1 139 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 PSPC1Q8WXF1 523 aaKnown RBP16.86■□□□□ 0.29
HOXA3-202ENST00000396352 RUNDC3BQ96NL0 473 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 POP1Q99575 1024 aaKnown RBP16.86■□□□□ 0.29
HOXA3-202ENST00000396352 GEMIN8Q9NWZ8 242 aaKnown RBP16.86■□□□□ 0.29
HOXA3-202ENST00000396352 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.86■□□□□ 0.298e-8■■■□□ 18.8
HOXA3-202ENST00000396352 COL20A1Q9P218 1284 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 GTF3C4Q9UKN8 822 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 ZBTB21Q9ULJ3 1066 aa16.86■□□□□ 0.29
HOXA3-202ENST00000396352 RASGRF2O14827 1237 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 SPOPO43791 374 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 SPP2Q13103 211 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 RNF207Q6ZRF8 634 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 HAUS6Q7Z4H7 955 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 PPM1KQ8N3J5 372 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 IL31RAQ8NI17 732 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 DEFB129Q9H1M3 183 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 ST6GALNAC4Q9H4F1 302 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 LRRC19Q9H756 370 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 AAASQ9NRG9 546 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 SLC12A4Q9UP95 1085 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 RGPD3A6NKT7 1758 aaPredicted RBP16.85■□□□□ 0.29
HOXA3-202ENST00000396352 RGPD4Q7Z3J3 1758 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 HSD17B4P51659 736 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 MAP2K1Q02750 393 aaPredicted RBP16.85■□□□□ 0.29
HOXA3-202ENST00000396352 CNGA2Q16280 664 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 MIGA2Q7L4E1 593 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 SLCO2A1Q92959 643 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 ZNF653Q96CK0 615 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 SH2D3AQ9BRG2 576 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 FBXO28Q9NVF7 368 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 GOLGA8IPA6NC78 632 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 GOLGA8JA6NMD2 632 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 DLATP10515 647 aaKnown RBP16.85■□□□□ 0.29
HOXA3-202ENST00000396352 CYP11B1P15538 503 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 SNCBQ16143 134 aa16.85■□□□□ 0.29
HOXA3-202ENST00000396352 PLA2G6O60733 806 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 MMP10P09238 476 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 RWDD2BP57060 319 aa16.84■□□□□ 0.29
HOXA3-202ENST00000396352 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
HOXA3-202ENST00000396352 AOC3Q16853 763 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms