RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RAPGEF5Q92565 580 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 NCLNQ969V3 563 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MED15Q96RN5 788 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 KIF17Q9P2E2 1029 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ZFP69BQ9UJL9 534 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ARHGAP26Q9UNA1 814 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 TRIM49BA6NDI0 452 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 GSG1L2A8MUP6 293 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 APOL1O14791 398 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MYO1DO94832 1006 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 KCNQ4P56696 695 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MAGOHP61326 146 aaKnown RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ANO4Q32M45 955 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 CLEC17AQ6ZS10 378 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 RPAINQ86UA6 219 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MB21D2Q8IYB1 491 aaPredicted RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 CATSPER1Q8NEC5 780 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 KCNH4Q9UQ05 1017 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 DLC1Q96QB1 1528 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 EMSYQ7Z589 1322 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 DGAT1O75907 488 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MAGEA9P43362 315 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 HDLBPQ00341 1268 aaKnown RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ICA1LQ8NDH6 482 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 C18orf8Q96DM3 657 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 FOPNLQ96NB1 174 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 DNAJC17Q9NVM6 304 aaKnown RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 PPARGC1AQ9UBK2 798 aaKnown RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ADAM21Q9UKJ8 722 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 A0A087WWV3 80 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 C19orf81C9J6K1 198 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 M0QYV0 167 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ESRRBO95718 433 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 FOXO4P98177 505 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 NSUN2Q08J23 767 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 RNF217Q8TC41 542 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 MAP3K14Q99558 947 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 PLA2G12BQ9BX93 195 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 STK33Q9BYT3 514 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 POLR3FQ9H1D9 316 aaPredicted RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 RPAP3Q9H6T3 665 aaPredicted RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 CFAP73A6NFT4 308 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 MED21Q13503 144 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SLC18A3Q16572 532 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SZRD1Q7Z422 152 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ALKBH8Q96BT7 664 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 CHAMP1Q96JM3 812 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 PCDHGB4Q9UN71 923 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 A8MXQ7 604 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 TBX3O15119 743 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ALDH1A1P00352 501 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 BRAFP15056 766 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 KCNJ6P48051 423 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 STAT4Q14765 748 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 FBXO38Q6PIJ6 1188 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 NUDCD3Q8IVD9 361 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 NEDD1Q8NHV4 660 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 N4BP2L2Q92802 583 aaPredicted RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ARHGEF1Q92888 912 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 KIF12Q96FN5 646 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 TGS1Q96RS0 853 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 HEMGNQ9BXL5 484 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 PIDD1Q9HB75 910 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 CHCHD3Q9NX63 227 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 INPP5FQ9Y2H2 1132 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ABCA9Q8IUA7 1624 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 FAM95CA0A1B0GW59 222 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 DPYSL4O14531 572 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 CD4P01730 458 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 CACNB3P54284 484 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 CDK17Q00537 523 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 POU5F1BQ06416 359 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 IER5Q5VY09 327 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 HAUS6Q7Z4H7 955 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SCFD1Q8WVM8 642 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 VPS11Q9H270 941 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ANLNQ9NQW6 1124 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ITIH6Q6UXX5 1313 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SLC16A3O15427 465 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 GGCXP38435 758 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 MTHFD1LQ6UB35 978 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 PATL1Q86TB9 770 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 DHX40Q8IX18 779 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ATL2Q8NHH9 583 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SENP7Q9BQF6 1050 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SNX5Q9Y5X3 404 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 E9PMD0 336 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 DIAPH2O60879 1101 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 TYK2P29597 1187 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 PTPN21Q16825 1174 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 QRICH1Q2TAL8 776 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 P3H1Q32P28 736 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 RCOR2Q8IZ40 523 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SLC26A7Q8TE54 656 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 BTBD6Q96KE9 485 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SLC13A1Q9BZW2 595 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 NEUROG2Q9H2A3 272 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 FAM217BQ9NTX9 383 aaPredicted RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 APEX2Q9UBZ4 518 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 INTUQ9ULD6 942 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms