RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MRPS6P82932 125 aaKnown RBP22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 CYP24A1Q07973 514 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 TRIM14Q14142 442 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 HS1BP3Q53T59 392 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 USP37Q86T82 979 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 CDR2LQ86X02 465 aaPredicted RBP22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 CPB2Q96IY4 423 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 MMRN2Q9H8L6 949 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 NOD1Q9Y239 953 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 CEP350Q5VT06 3117 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 ABLIM1O14639 778 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 TSPAN1O60635 241 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 ARF4P18085 180 aaPredicted RBP22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 KLK7P49862 253 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 DLG4P78352 724 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 NCBP1Q09161 790 aaKnown RBP22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 SNX17Q15036 470 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 PCBP1Q15365 356 aaKnown RBP eCLIP22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 EEF1DP3Q658K8 133 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 CATSPER4Q7RTX7 472 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 CCDC150Q8NCX0 1101 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 CPLX3Q8WVH0 158 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 NUP58Q9BVL2 599 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 CELF4Q9BZC1 486 aaKnown RBP22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 SIK3Q9Y2K2 1263 aa22.21■■□□□ 1.15
VCPKMT-202ENST00000395860 A0A0U1RQG5 324 aaPredicted RBP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 OGTO15294 1046 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 SFPQP23246 707 aaKnown RBP eCLIP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 FMO5P49326 533 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 CTCFP49711 727 aaPredicted RBP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 RBL2Q08999 1139 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 CRELD2Q6UXH1 353 aaPredicted RBP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 PLEKHO2Q8TD55 490 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 TMC2Q8TDI7 906 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 CCDC127Q96BQ5 260 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 TRPV2Q9Y5S1 764 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 GYPCP04921 128 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 HSPA1AP0DMV8 641 aaKnown RBP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 HSPA1BP0DMV9 641 aaKnown RBP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 TRIM21P19474 475 aaKnown RBP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 KCNMA1Q12791 1236 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 ARID5BQ14865 1188 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 ZBTB41Q5SVQ8 909 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 PARD3BQ8TEW8 1205 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 WNT8BQ93098 351 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 CRACR2AQ9BSW2 395 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 CDT1Q9H211 546 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 PDZD7Q9H5P4 517 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 TRMT13Q9NUP7 481 aaKnown RBP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 RBAKQ9NYW8 714 aaPredicted RBP22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 OGDHLQ9ULD0 1010 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 CDY2AQ9Y6F7 541 aa22.2■■□□□ 1.14
VCPKMT-202ENST00000395860 CASP14P31944 242 aa22.19■■□□□ 1.14
VCPKMT-202ENST00000395860 MCCD1P59942 119 aaPredicted RBP22.19■■□□□ 1.14
VCPKMT-202ENST00000395860 PTK7Q13308 1070 aa22.19■■□□□ 1.14
VCPKMT-202ENST00000395860 PKN2Q16513 984 aaKnown RBP22.19■■□□□ 1.14
VCPKMT-202ENST00000395860 SEZ6Q53EL9 994 aa22.19■■□□□ 1.14
VCPKMT-202ENST00000395860 RPAINQ86UA6 219 aa22.19■■□□□ 1.14
VCPKMT-202ENST00000395860 TMEM40Q8WWA1 233 aa22.19■■□□□ 1.14
VCPKMT-202ENST00000395860 ZNF830Q96NB3 372 aaPredicted RBP22.19■■□□□ 1.14
VCPKMT-202ENST00000395860 GTPBP10A4D1E9 387 aaKnown RBP22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 AKR1B15C9JRZ8 316 aaPredicted RBP22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 STX10O60499 249 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 N4BP1O75113 896 aaKnown RBP22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 ENPEPQ07075 957 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 GOLGA8FQ08AF8 430 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 GOLGA8DPQ0D2H9 430 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 GBP6Q6ZN66 633 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 LRRC8AQ8IWT6 810 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 THNSL1Q8IYQ7 743 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 SLC43A3Q8NBI5 491 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 CACTINQ8WUQ7 758 aaKnown RBP22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 ADPGKQ9BRR6 497 aa22.18■■□□□ 1.14
VCPKMT-202ENST00000395860 A0A1B0GUA9 196 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 LRRIQ3A6PVS8 624 aaPredicted RBP22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 FAM189A1O60320 539 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 CTSHP09668 335 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 DLATP10515 647 aaKnown RBP22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 MCF2P10911 925 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 THPOP40225 353 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 TNFSF9P41273 254 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 ADKP55263 362 aaKnown RBP22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 MYL7Q01449 175 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 PSMD6Q15008 389 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 EXOC3L4Q17RC7 722 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 CBWD6Q4V339 395 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 CBWD3Q5JTY5 395 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 CBWD5Q5RIA9 395 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 C1orf220Q5T0J3 134 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 NEK11Q8NG66 645 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 IQCDQ96DY2 449 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 ZNF333Q96JL9 665 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 FNBP1Q96RU3 617 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 LSM14BQ9BX40 385 aaKnown RBP22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 FAM207AQ9NSI2 230 aaPredicted RBP22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 ARVCFO00192 962 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 GCLMP48507 274 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 PPP3CAQ08209 521 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 FIGNQ5HY92 759 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 CNGA4Q8IV77 575 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms