RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 ZBTB16Q05516 673 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 PDCD6IPQ8WUM4 868 aaKnown RBP13.74□□□□□ -0.21
CAST-206ENST00000395812 TRIM9Q9C026 710 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 RAB17Q9H0T7 212 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 NRCAMQ92823 1304 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 POLR1AO95602 1720 aaPredicted RBP13.74□□□□□ -0.21
CAST-206ENST00000395812 MRC1P22897 1456 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 BUB1O43683 1085 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 CKMP06732 381 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 ATP5DP30049 168 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 ADCY8P40145 1251 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.214e-6■■■□□ 16.4
CAST-206ENST00000395812 PSMC1P62191 440 aaKnown RBP13.73□□□□□ -0.21
CAST-206ENST00000395812 SFSWAPQ12872 951 aaKnown RBP13.73□□□□□ -0.21
CAST-206ENST00000395812 NFE2Q16621 373 aaPredicted RBP13.73□□□□□ -0.21
CAST-206ENST00000395812 CTXN3Q4LDR2 81 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 MFSD1Q9H3U5 465 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 PFDN4Q9NQP4 134 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 FAM205CA6NFA0 338 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 OPA1O60313 960 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 TRIM49P0CI25 452 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 TRIM49CP0CI26 452 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 SNRPFP62306 86 aaKnown RBP13.73□□□□□ -0.21
CAST-206ENST00000395812 ZBED6P86452 979 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 E2F5Q15329 346 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 EFHC2Q5JST6 749 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 KIAA1755Q5JYT7 1200 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 ARHGEF18Q6ZSZ5 1173 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 FIBCD1Q8N539 461 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 AGO4Q9HCK5 861 aaKnown RBP13.73□□□□□ -0.21
CAST-206ENST00000395812 KCNK9Q9NPC2 374 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 MAD1L1Q9Y6D9 718 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 EGFRP00533 1210 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 LGALS2P05162 132 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 SSTR3P32745 418 aaPredicted RBP13.73□□□□□ -0.21
CAST-206ENST00000395812 SEC23AQ15436 765 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 GLRA4Q5JXX5 417 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 C4orf19Q8IY42 314 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 UBLCP1Q8WVY7 318 aaPredicted RBP13.73□□□□□ -0.21
CAST-206ENST00000395812 ASIC4Q96FT7 647 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 NT5C1AQ9BXI3 368 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 ABCC6O95255 1503 aa13.73□□□□□ -0.21
CAST-206ENST00000395812 AOC2O75106 756 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 SNRNP35Q16560 246 aaKnown RBP13.72□□□□□ -0.21
CAST-206ENST00000395812 NIPA1Q7RTP0 329 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 PHLDB2Q86SQ0 1253 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 IFNL1Q8IU54 200 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 CDKL2Q92772 493 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 HIPK3Q9H422 1215 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 IGFLR1Q9H665 355 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 NKIRAS1Q9NYS0 192 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 FBXL21Q9UKT6 434 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 TOM1L1O75674 476 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 TFDP2Q14188 446 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 TDRD10Q5VZ19 366 aaKnown RBP13.72□□□□□ -0.21
CAST-206ENST00000395812 TRIM72Q6ZMU5 477 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 CATSPER3Q86XQ3 398 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
CAST-206ENST00000395812 FTHL17Q9BXU8 183 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 RANBP17Q9H2T7 1088 aaKnown RBP13.72□□□□□ -0.21
CAST-206ENST00000395812 VPS37BQ9H9H4 285 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 PI4K2BG5E9Z4 385 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 XYLBO75191 536 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 CASP14P31944 242 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 EPHB3P54753 998 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 MAP7D1Q3KQU3 841 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 PASD1Q8IV76 773 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 KRT12Q99456 494 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 LCMT1Q9UIC8 334 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 INHAP05111 366 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 RHOXF2BP0C7M4 288 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 CASP1P29466 404 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 AVPR1AP37288 418 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 RHOXF2Q9BQY4 288 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 IL17RBQ9NRM6 502 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 DSEQ9UL01 958 aa13.72□□□□□ -0.21
CAST-206ENST00000395812 KRIT1O00522 736 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 TLL1O43897 1013 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 ZNF445P59923 1031 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 CRHR2Q13324 411 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 PPIGQ13427 754 aaKnown RBP eCLIP13.71□□□□□ -0.213e-6■□□□□ 11.2
CAST-206ENST00000395812 C10orf76Q5T2E6 689 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 ALKBH5Q6P6C2 394 aaKnown RBP13.71□□□□□ -0.21
CAST-206ENST00000395812 LBX2Q6XYB7 198 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 VSIG10LQ86VR7 867 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 C11orf70Q9BRQ4 267 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 CACYBPQ9HB71 228 aaKnown RBP13.71□□□□□ -0.21
CAST-206ENST00000395812 SAMSN1Q9NSI8 373 aaKnown RBP13.71□□□□□ -0.21
CAST-206ENST00000395812 SIGLEC1Q9BZZ2 1709 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
CAST-206ENST00000395812 NME3Q13232 169 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 PKN2Q16513 984 aaKnown RBP13.71□□□□□ -0.21
CAST-206ENST00000395812 FAM102AQ5T9C2 384 aaPredicted RBP13.71□□□□□ -0.21
CAST-206ENST00000395812 ZNF410Q86VK4 478 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 IFT20Q8IY31 132 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 C7orf61Q8IZ16 206 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 HPDLQ96IR7 371 aa13.71□□□□□ -0.21
CAST-206ENST00000395812 ADAM2Q99965 735 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms