RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 STRA6Q9BX79 667 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 CDT1Q9H211 546 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 IKZF4Q9H2S9 585 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 ST6GALNAC4Q9H4F1 302 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 MRPL44Q9H9J2 332 aaKnown RBP18.16■□□□□ 0.5
CXCL1-201ENST00000395761 TBC1D13Q9NVG8 400 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 SNTG2Q9NY99 539 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 KLK14Q9P0G3 267 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 SEL1LQ9UBV2 794 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 PARP2Q9UGN5 583 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 USP25Q9UHP3 1055 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 GADD45BO75293 160 aaPredicted RBP18.15■□□□□ 0.5
CXCL1-201ENST00000395761 PPP1R37O75864 691 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 ZNF202O95125 648 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 MYBP10242 640 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 MCM4P33991 863 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 CASP5P51878 434 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 SPOUT1Q5T280 376 aaKnown RBP18.15■□□□□ 0.5
CXCL1-201ENST00000395761 ZPBP2Q6X784 338 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 LRRC43Q8N309 656 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 SLC17A8Q8NDX2 589 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 ZFP42Q96MM3 310 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 SAMD11Q96NU1 681 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 TCHPQ9BT92 498 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 HAPLN2Q9GZV7 340 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 CXCL16Q9H2A7 254 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 OLFML3Q9NRN5 406 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 MIOSQ9NXC5 875 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 GDAQ9Y2T3 454 aa18.15■□□□□ 0.5
CXCL1-201ENST00000395761 ARL5CA6NH57 179 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 B4GALT3O60512 393 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 PRPF40AO75400 957 aaKnown RBP18.14■□□□□ 0.49
CXCL1-201ENST00000395761 TOM1L1O75674 476 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 POMCP01189 267 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 SCP2P22307 547 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 PBX3P40426 434 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 MLH1P40692 756 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 KCNA1Q09470 495 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 DCAF4L1Q3SXM0 396 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 ZNF568Q3ZCX4 644 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 MPZL3Q6UWV2 235 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 KRBA2Q6ZNG9 492 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 ZNF280BQ86YH2 543 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 HACE1Q8IYU2 909 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 CEP120Q8N960 986 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 GLIS3Q8NEA6 775 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 GSTCDQ8NEC7 633 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 BICD1Q96G01 975 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 UBN1Q9NPG3 1134 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 LMBRD1Q9NUN5 540 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 ANKFY1Q9P2R3 1169 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 GIT1Q9Y2X7 761 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 RWDD3Q9Y3V2 267 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 CDH23Q9H251 3354 aa18.14■□□□□ 0.49
CXCL1-201ENST00000395761 TISP43B9A030 160 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 ANKRD63C9JTQ0 380 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 C5orf67F2Z3F1 127 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 H3BNC9 293 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 RECQL4O94761 1208 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 DDHD2O94830 711 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 GCNT3O95395 438 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 RB1P06400 928 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 PRR29P0C7W0 189 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 MCF2P10911 925 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 HARSP12081 509 aaKnown RBP18.13■□□□□ 0.49
CXCL1-201ENST00000395761 IGFBP4P22692 258 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 SCNN1GP51170 649 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 OSTNP61366 133 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 GPM6BQ13491 265 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 SNW1Q13573 536 aaKnown RBP18.13■□□□□ 0.49
CXCL1-201ENST00000395761 SLC39A4Q6P5W5 647 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 UNC13DQ70J99 1090 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 MAP4K3Q8IVH8 894 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 FMR1NBQ8N0W7 255 aaPredicted RBP18.13■□□□□ 0.49
CXCL1-201ENST00000395761 KLHL23Q8NBE8 558 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 COLGALT1Q8NBJ5 622 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 ENGASEQ8NFI3 743 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 URGCPQ8TCY9 931 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 MRPL9Q9BYD2 267 aaKnown RBP18.13■□□□□ 0.49
CXCL1-201ENST00000395761 NRDE2Q9H7Z3 1164 aa18.13■□□□□ 0.49
CXCL1-201ENST00000395761 HNRNPDLO14979 420 aaKnown RBP18.12■□□□□ 0.49
CXCL1-201ENST00000395761 INPPL1O15357 1258 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 GTPBP6O43824 516 aaPredicted RBP18.12■□□□□ 0.49
CXCL1-201ENST00000395761 KLRC4O43908 158 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 PRPF6O94906 941 aaKnown RBP18.12■□□□□ 0.49
CXCL1-201ENST00000395761 PIGRP01833 764 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 FOSL2P15408 326 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 LIG4P49917 911 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 UBE2HP62256 183 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 EHHADHQ08426 723 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 SEZ6Q53EL9 994 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 APBB1IPQ7Z5R6 666 aaPredicted RBP18.12■□□□□ 0.49
CXCL1-201ENST00000395761 THNSL1Q8IYQ7 743 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 GAS2L1Q99501 681 aaPredicted RBP18.12■□□□□ 0.49
CXCL1-201ENST00000395761 PLVAPQ9BX97 442 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 GBP3Q9H0R5 595 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
CXCL1-201ENST00000395761 PCDHB13Q9Y5F0 798 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 MYO9BQ13459 2157 aa18.12■□□□□ 0.49
CXCL1-201ENST00000395761 PVALEFA0A1B0GWK0 134 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms