RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SLC43A3Q8NBI5 491 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 ATRIPQ8WXE1 791 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 TMEM143Q96AN5 459 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 ACCSQ96QU6 501 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 JPH2Q9BR39 696 aaPredicted RBP16.45■□□□□ 0.22
SCAF11-204ENST00000395454 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 GPRC5CQ9NQ84 441 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 XPNPEP1Q9NQW7 623 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 CLIC2O15247 247 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 KIF5CO60282 957 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 PQBP1O60828 265 aaKnown RBP16.45■□□□□ 0.22
SCAF11-204ENST00000395454 CYP2C9P11712 490 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 TMOD1P28289 359 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 PTPN11Q06124 597 aaPredicted RBP16.45■□□□□ 0.22
SCAF11-204ENST00000395454 DRP2Q13474 957 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 HGSNATQ68CP4 663 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 LSM14BQ9BX40 385 aaKnown RBP16.45■□□□□ 0.22
SCAF11-204ENST00000395454 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
SCAF11-204ENST00000395454 IKZF4Q9H2S9 585 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 LZTFL1Q9NQ48 299 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 IGKV6-21A0A0C4DH24 114 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 RBAK-RBAKDNI3L0D1 243 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 GAS2O43903 313 aaKnown RBP16.44■□□□□ 0.22
SCAF11-204ENST00000395454 B4GALT4O60513 344 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 ARHGAP29Q52LW3 1261 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 HAUS6Q7Z4H7 955 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 TMEM161BQ8NDZ6 487 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 SEZ6LQ9BYH1 1024 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 TRPV6Q9H1D0 765 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 AIPL1Q9NZN9 384 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 MROH7Q68CQ1 1323 aa16.44■□□□□ 0.22
SCAF11-204ENST00000395454 SLU7O95391 586 aaKnown RBP16.43■□□□□ 0.22
SCAF11-204ENST00000395454 SCP2P22307 547 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 PON1P27169 355 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 CDK7P50613 346 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 RUFY4Q6ZNE9 571 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 RRAGAQ7L523 313 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 MAP4K3Q8IVH8 894 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 KSR1Q8IVT5 923 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 AKT3Q9Y243 479 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 DAAM1Q9Y4D1 1078 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 ZNF263O14978 683 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 CASQ1P31415 396 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 ABCD1P33897 745 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 EXOC3L4Q17RC7 722 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 TRIM60Q495X7 471 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 TAF2Q6P1X5 1199 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 FAM126BQ8IXS8 530 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 DNAJB3Q8WWF6 145 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 TCP11Q8WWU5 503 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 MAP7D2Q96T17 732 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 IRX2Q9BZI1 471 aaPredicted RBP16.43■□□□□ 0.22
SCAF11-204ENST00000395454 POLR3FQ9H1D9 316 aaPredicted RBP16.43■□□□□ 0.22
SCAF11-204ENST00000395454 SIX2Q9NPC8 291 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 FRMD4BQ9Y2L6 1034 aa16.43■□□□□ 0.22
SCAF11-204ENST00000395454 NPTX2P47972 431 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 DMP1Q13316 513 aaPredicted RBP16.42■□□□□ 0.22
SCAF11-204ENST00000395454 MKRN4PQ13434 485 aaPredicted RBP16.42■□□□□ 0.22
SCAF11-204ENST00000395454 KLHDC7AQ5VTJ3 777 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 IER5Q5VY09 327 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 GBP6Q6ZN66 633 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 SERINC5Q86VE9 423 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 RHPN2Q8IUC4 686 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 PSPC1Q8WXF1 523 aaKnown RBP16.42■□□□□ 0.22
SCAF11-204ENST00000395454 ANKRD7Q92527 254 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 CCDC42Q96M95 316 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 PPP1R16BQ96T49 567 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 CRACR2AQ9BSW2 395 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 SUCLA2Q9P2R7 463 aaPredicted RBP16.42■□□□□ 0.22
SCAF11-204ENST00000395454 ATP11BQ9Y2G3 1177 aa16.42■□□□□ 0.22
SCAF11-204ENST00000395454 SMIM35A0A1B0GVV1 85 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 PMM2O15305 246 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 VTNP04004 478 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 SERPING1P05155 500 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 PLEKP08567 350 aaPredicted RBP16.41■□□□□ 0.22
SCAF11-204ENST00000395454 UCHL3P15374 230 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 KIF11P52732 1056 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 VAV2P52735 878 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 PEX3P56589 373 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 POLR2FP61218 127 aaKnown RBP16.41■□□□□ 0.22
SCAF11-204ENST00000395454 TMEM62Q0P6H9 643 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 SNX17Q15036 470 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 LRRC26Q2I0M4 334 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 C1orf53Q5VUE5 145 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 UBE2Q1Q7Z7E8 422 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 KIAA0319LQ8IZA0 1049 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 SYCP3Q8IZU3 236 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 LINC01465Q8N7H1 131 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 KCNG1Q9UIX4 513 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 MRFAP1Q9Y605 127 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 IPO7O95373 1038 aaKnown RBP16.41■□□□□ 0.22
SCAF11-204ENST00000395454 ABL1P00519 1130 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 ARL2P36404 184 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 SMTNP53814 917 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 ENPEPQ07075 957 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 NCBP1Q09161 790 aaKnown RBP16.41■□□□□ 0.22
SCAF11-204ENST00000395454 BFSP1Q12934 665 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 TUBB2AQ13885 445 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 DCAF17Q5H9S7 520 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms