RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CNTNAP2Q9UHC6 1331 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 INPPL1O15357 1258 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 TSPAN1O60635 241 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 MED24O75448 989 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 CXCL14O95715 111 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 GLRA2P23416 452 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 AFF1P51825 1210 aaKnown RBP15.02■□□□□ -0
SCAF11-203ENST00000395453 MBTD1Q05BQ5 628 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 ANGPT1Q15389 498 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 ZNF174Q15697 407 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 KIAA1841Q6NSI8 718 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 DGLUCYQ7Z3D6 616 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 NOSTRINQ8IVI9 506 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 VPS52Q8N1B4 723 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 C4orf32Q8N8J7 132 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 CNNM3Q8NE01 707 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 KCNG4Q8TDN1 519 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 BCL7CQ8WUZ0 217 aaPredicted RBP15.02■□□□□ -0
SCAF11-203ENST00000395453 CCDC51Q96ER9 411 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 RTP3Q9BQQ7 232 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 ZBP1Q9H171 429 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 RSAD1Q9HA92 442 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 DZANK1Q9NVP4 752 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 INPP5FQ9Y2H2 1132 aa15.02■□□□□ -0
SCAF11-203ENST00000395453 CLASP2O75122 1294 aaKnown RBP15.01□□□□□ -0.01
SCAF11-203ENST00000395453 DDHD2O94830 711 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 ERLIN2O94905 339 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 U2AF2P26368 475 aaKnown RBP eCLIP15.01□□□□□ -0.015e-8■■■■■ 30.4
SCAF11-203ENST00000395453 RPA1P27694 616 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 TRAPPC10P48553 1259 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 SLC11A1P49279 550 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 RNASELQ05823 741 aaKnown RBP15.01□□□□□ -0.01
SCAF11-203ENST00000395453 RARS2Q5T160 578 aaKnown RBP15.01□□□□□ -0.01
SCAF11-203ENST00000395453 NOTUMQ6P988 496 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 DTWD2Q8NBA8 298 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 URGCPQ8TCY9 931 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 RMDN1Q96DB5 314 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 VN1R3Q9BXE9 311 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 EIF2AQ9BY44 585 aaKnown RBP15.01□□□□□ -0.01
SCAF11-203ENST00000395453 CSRNP2Q9H175 543 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 UBN1Q9NPG3 1134 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 IPPQ9Y573 584 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 DNAH14Q0VDD8 3507 aa15.01□□□□□ -0.01
SCAF11-203ENST00000395453 FRYLO94915 3013 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 MED19A0JLT2 244 aaPredicted RBP15□□□□□ -0.01
SCAF11-203ENST00000395453 INO80B-WBP1J3KQ70 363 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 PI15O43692 258 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 LMNAP02545 664 aaKnown RBP15□□□□□ -0.01
SCAF11-203ENST00000395453 ALDH2P05091 517 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 WEE2P0C1S8 567 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 OR52Z1P0C646 297 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 CTSAP10619 480 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 ARF4P18085 180 aaPredicted RBP15□□□□□ -0.01
SCAF11-203ENST00000395453 MUTP22033 750 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 CA8P35219 290 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 NCBP1Q09161 790 aaKnown RBP15□□□□□ -0.01
SCAF11-203ENST00000395453 GIT2Q14161 759 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 TTC38Q5R3I4 469 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 TMEM87AQ8NBN3 555 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 ACSF2Q96CM8 615 aaPredicted RBP15□□□□□ -0.01
SCAF11-203ENST00000395453 CPB2Q96IY4 423 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 TMEM175Q9BSA9 504 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 POLR3FQ9H1D9 316 aaPredicted RBP15□□□□□ -0.01
SCAF11-203ENST00000395453 PCDHB8Q9UN66 801 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 NCOR2Q9Y618 2525 aa15□□□□□ -0.01
SCAF11-203ENST00000395453 A0A1B0GUA9 196 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 USO1O60763 962 aaKnown RBP14.99□□□□□ -0.01
SCAF11-203ENST00000395453 ITGA4P13612 1032 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 NPR3P17342 541 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 TOB1P50616 345 aaPredicted RBP14.99□□□□□ -0.01
SCAF11-203ENST00000395453 TDGQ13569 410 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 GSE1Q14687 1217 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 C12orf76Q8N812 135 aaPredicted RBP14.99□□□□□ -0.01
SCAF11-203ENST00000395453 FAM184AQ8NB25 1140 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 MCPH1Q8NEM0 835 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 CCDC43Q96MW1 224 aaKnown RBP14.99□□□□□ -0.01
SCAF11-203ENST00000395453 GBP3Q9H0R5 595 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 GPRC5CQ9NQ84 441 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 STK39Q9UEW8 545 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 FBXL21Q9UKT6 434 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 EPG5Q9HCE0 2579 aa14.99□□□□□ -0.01
SCAF11-203ENST00000395453 TPRP12270 2363 aaKnown RBP14.99□□□□□ -0.01
SCAF11-203ENST00000395453 ARL5CA6NH57 179 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 NRP1O14786 923 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 LILRB3O75022 631 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 EFEMP2O95967 443 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 POMCP01189 267 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 DSC1Q08554 894 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 PDIA5Q14554 519 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 PUM1Q14671 1186 aaKnown RBP eCLIP14.98□□□□□ -0.012e-8■■■■□ 19.4
SCAF11-203ENST00000395453 FAM187BQ17R55 369 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 CDCA2Q69YH5 1023 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-203ENST00000395453 OTOP3Q7RTS5 596 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 COLGALT2Q8IYK4 626 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 ERMNQ8TAM6 284 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 SLC22A17Q8WUG5 538 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 AUTS2Q8WXX7 1259 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 FZD8Q9H461 694 aa14.98□□□□□ -0.01
SCAF11-203ENST00000395453 MIOSQ9NXC5 875 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms