RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 EXOC3L4Q17RC7 722 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 DCAF17Q5H9S7 520 aaPredicted RBP20.99■□□□□ 0.95
LMNB1-202ENST00000395354 TRIM65Q6PJ69 517 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 GBP6Q6ZN66 633 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 INTS8Q75QN2 995 aaKnown RBP20.99■□□□□ 0.95
LMNB1-202ENST00000395354 UBE2Q1Q7Z7E8 422 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 XXYLT1Q8NBI6 393 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 TMEM143Q96AN5 459 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 TRPV6Q9H1D0 765 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 FBXL5Q9UKA1 691 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 NOD1Q9Y239 953 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 DAAM1Q9Y4D1 1078 aa20.99■□□□□ 0.95
LMNB1-202ENST00000395354 DENND3A2RUS2 1198 aa20.98■□□□□ 0.95
LMNB1-202ENST00000395354 GAS2O43903 313 aaKnown RBP20.98■□□□□ 0.95
LMNB1-202ENST00000395354 KRT83P78385 493 aa20.98■□□□□ 0.95
LMNB1-202ENST00000395354 C1orf53Q5VUE5 145 aa20.98■□□□□ 0.95
LMNB1-202ENST00000395354 TCERG1LQ5VWI1 586 aa20.98■□□□□ 0.95
LMNB1-202ENST00000395354 RRAGAQ7L523 313 aa20.98■□□□□ 0.95
LMNB1-202ENST00000395354 GANQ9H2C0 597 aa20.98■□□□□ 0.95
LMNB1-202ENST00000395354 ARHGAP28Q9P2N2 729 aa20.98■□□□□ 0.95
LMNB1-202ENST00000395354 MYO6Q9UM54 1294 aa20.98■□□□□ 0.95
LMNB1-202ENST00000395354 SMIM35A0A1B0GVV1 85 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 EIF3CLB5ME19 914 aaKnown RBP20.97■□□□□ 0.95
LMNB1-202ENST00000395354 B4GALT4O60513 344 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 KRT13P13646 458 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 ARL2P36404 184 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 NAMPTP43490 491 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 CLCN3P51790 818 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 BFSP1Q12934 665 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 DRP2Q13474 957 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 SNX17Q15036 470 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 IER5Q5VY09 327 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 RUFY4Q6ZNE9 571 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 ZNF662Q6ZS27 426 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 SERINC5Q86VE9 423 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 KIAA0319LQ8IZA0 1049 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 LINC01465Q8N7H1 131 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 MYRIPQ8NFW9 859 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 TCP11Q8WWU5 503 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 EIF3CQ99613 913 aaKnown RBP20.97■□□□□ 0.95
LMNB1-202ENST00000395354 NHEJ1Q9H9Q4 299 aaPredicted RBP20.97■□□□□ 0.95
LMNB1-202ENST00000395354 HSPBP1Q9NZL4 362 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 SUCLA2Q9P2R7 463 aaPredicted RBP20.97■□□□□ 0.95
LMNB1-202ENST00000395354 MROH7Q68CQ1 1323 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 LRRC53A6NM62 1247 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 PQBP1O60828 265 aaKnown RBP20.97■□□□□ 0.95
LMNB1-202ENST00000395354 ENPEPQ07075 957 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 DPY19L2P1Q6NXN4 242 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 TAF2Q6P1X5 1199 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 ANKRD33Q7Z3H0 272 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 FAM126BQ8IXS8 530 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 ZNF592Q92610 1267 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 CRACR2AQ9BSW2 395 aa20.97■□□□□ 0.95
LMNB1-202ENST00000395354 FAM49AQ9H0Q0 323 aaPredicted RBP20.97■□□□□ 0.95
LMNB1-202ENST00000395354 PON1P27169 355 aa20.96■□□□□ 0.95
LMNB1-202ENST00000395354 FMO5P49326 533 aa20.96■□□□□ 0.95
LMNB1-202ENST00000395354 TLE2Q04725 743 aa20.96■□□□□ 0.95
LMNB1-202ENST00000395354 TRIM60Q495X7 471 aa20.96■□□□□ 0.95
LMNB1-202ENST00000395354 SYT10Q6XYQ8 523 aa20.96■□□□□ 0.95
LMNB1-202ENST00000395354 DNAJB3Q8WWF6 145 aa20.96■□□□□ 0.95
LMNB1-202ENST00000395354 PRPF31Q8WWY3 499 aaKnown RBP20.96■□□□□ 0.95
LMNB1-202ENST00000395354 TOX2Q96NM4 488 aa20.96■□□□□ 0.95
LMNB1-202ENST00000395354 CBWD1Q9BRT8 395 aa20.96■□□□□ 0.95
LMNB1-202ENST00000395354 SSU72P8A0A1W2PR75 194 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 DCDC2CA8MYV0 355 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 TLR3O15455 904 aaKnown RBP20.95■□□□□ 0.94
LMNB1-202ENST00000395354 P4HA2O15460 535 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 N4BP1O75113 896 aaKnown RBP20.95■□□□□ 0.94
LMNB1-202ENST00000395354 IPO7O95373 1038 aaKnown RBP20.95■□□□□ 0.94
LMNB1-202ENST00000395354 POLR2FP61218 127 aaKnown RBP20.95■□□□□ 0.94
LMNB1-202ENST00000395354 PTK7Q13308 1070 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 HSP90AA2PQ14568 343 aaPredicted RBP20.95■□□□□ 0.94
LMNB1-202ENST00000395354 LRRC26Q2I0M4 334 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 KLHDC7AQ5VTJ3 777 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 SFMBT2Q5VUG0 894 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 ACRBPQ8NEB7 543 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 PSPC1Q8WXF1 523 aaKnown RBP20.95■□□□□ 0.94
LMNB1-202ENST00000395354 CCDC42Q96M95 316 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 MAP7D2Q96T17 732 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 AKT3Q9Y243 479 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 ATP11BQ9Y2G3 1177 aa20.95■□□□□ 0.94
LMNB1-202ENST00000395354 PMM2O15305 246 aa20.94■□□□□ 0.94
LMNB1-202ENST00000395354 CD4P01730 458 aa20.94■□□□□ 0.94
LMNB1-202ENST00000395354 GARTP22102 1010 aa20.94■□□□□ 0.94
LMNB1-202ENST00000395354 GTF2F1P35269 517 aaKnown RBP eCLIP20.94■□□□□ 0.94
LMNB1-202ENST00000395354 MAPK8IP2Q13387 824 aaPredicted RBP20.94■□□□□ 0.94
LMNB1-202ENST00000395354 NME8Q8N427 588 aa20.94■□□□□ 0.94
LMNB1-202ENST00000395354 KIFC3Q9BVG8 833 aa20.94■□□□□ 0.94
LMNB1-202ENST00000395354 AIPL1Q9NZN9 384 aa20.94■□□□□ 0.94
LMNB1-202ENST00000395354 MYO1AQ9UBC5 1043 aa20.94■□□□□ 0.94
LMNB1-202ENST00000395354 ADGRA3Q8IWK6 1321 aa20.94■□□□□ 0.94
LMNB1-202ENST00000395354 KIAA0391O15091 583 aaKnown RBP20.93■□□□□ 0.94
LMNB1-202ENST00000395354 ASAP2O43150 1006 aa20.93■□□□□ 0.94
LMNB1-202ENST00000395354 SLC9A1P19634 815 aa20.93■□□□□ 0.94
LMNB1-202ENST00000395354 GLRA2P23416 452 aa20.93■□□□□ 0.94
LMNB1-202ENST00000395354 VAMP7P51809 220 aa20.93■□□□□ 0.94
LMNB1-202ENST00000395354 MXD4Q14582 209 aaPredicted RBP20.93■□□□□ 0.94
LMNB1-202ENST00000395354 RSPH3Q86UC2 560 aa20.93■□□□□ 0.94
LMNB1-202ENST00000395354 RHPN2Q8IUC4 686 aa20.93■□□□□ 0.94
LMNB1-202ENST00000395354 ASAP3Q8TDY4 903 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms