RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 MTMR9Q96QG7 549 aa21.37■■□□□ 1.01
COL11A2-204ENST00000395194 RPS6KC1Q96S38 1066 aa21.37■■□□□ 1.01
COL11A2-204ENST00000395194 CACNG4Q9UBN1 327 aa21.37■■□□□ 1.01
COL11A2-204ENST00000395194 STK39Q9UEW8 545 aa21.37■■□□□ 1.01
COL11A2-204ENST00000395194 USTQ9Y2C2 406 aa21.37■■□□□ 1.01
COL11A2-204ENST00000395194 TRIP11Q15643 1979 aa21.36■■□□□ 1.01
COL11A2-204ENST00000395194 H0Y858 1186 aa21.36■■□□□ 1.01
COL11A2-204ENST00000395194 ADH1AP07327 375 aa21.36■■□□□ 1.01
COL11A2-204ENST00000395194 SPATA31D3P0C874 917 aa21.36■■□□□ 1.01
COL11A2-204ENST00000395194 PCBP1Q15365 356 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL11A2-204ENST00000395194 SPATA31D4Q6ZUB0 917 aa21.36■■□□□ 1.01
COL11A2-204ENST00000395194 PLCD3Q8N3E9 789 aa21.36■■□□□ 1.01
COL11A2-204ENST00000395194 ACSF2Q96CM8 615 aaPredicted RBP21.36■■□□□ 1.01
COL11A2-204ENST00000395194 PARP2Q9UGN5 583 aa21.36■■□□□ 1.01
COL11A2-204ENST00000395194 INPPL1O15357 1258 aa21.35■■□□□ 1.01
COL11A2-204ENST00000395194 MED24O75448 989 aa21.35■■□□□ 1.01
COL11A2-204ENST00000395194 RFPL2O75678 378 aa21.35■■□□□ 1.01
COL11A2-204ENST00000395194 GLUD1P00367 558 aa21.35■■□□□ 1.01
COL11A2-204ENST00000395194 HACE1Q8IYU2 909 aa21.35■■□□□ 1.01
COL11A2-204ENST00000395194 TMEM105Q8N8V8 129 aa21.35■■□□□ 1.01
COL11A2-204ENST00000395194 ATOH1Q92858 354 aaPredicted RBP21.35■■□□□ 1.01
COL11A2-204ENST00000395194 MFSD1Q9H3U5 465 aa21.35■■□□□ 1.01
COL11A2-204ENST00000395194 GIT1Q9Y2X7 761 aa21.35■■□□□ 1.01
COL11A2-204ENST00000395194 NR1I2O75469 434 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 SPATA31C1P0DKV0 1188 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 LIG1P18858 919 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 POU5F1BQ06416 359 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 KIAA0319Q5VV43 1072 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 SLC27A1Q6PCB7 646 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 OTOP3Q7RTS5 596 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 PALB2Q86YC2 1186 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 RNF168Q8IYW5 571 aaPredicted RBP21.34■■□□□ 1.01
COL11A2-204ENST00000395194 GSTCDQ8NEC7 633 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 GPR62Q9BZJ7 368 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 PPP4R2Q9NY27 417 aa21.34■■□□□ 1.01
COL11A2-204ENST00000395194 CCDC195A0A1B0GUA6 201 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 TTLL13PA6NNM8 815 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 RPL17P18621 184 aaKnown RBP21.33■■□□□ 1.01
COL11A2-204ENST00000395194 DSG1Q02413 1049 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 TMEM132AQ24JP5 1023 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 FUT10Q6P4F1 479 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 POTEGQ6S5H5 508 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 CATSPER3Q86XQ3 398 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 CCDC83Q8IWF9 413 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 COLEC11Q9BWP8 271 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 NFKBIZQ9BYH8 718 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 SSX2IPQ9Y2D8 614 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 USP20Q9Y2K6 914 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 DMDP11532 3685 aa21.33■■□□□ 1.01
COL11A2-204ENST00000395194 CFAP54Q96N23 3096 aa21.33■■□□□ 1
COL11A2-204ENST00000395194 VPS13AQ96RL7 3174 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 N4BP1O75113 896 aaKnown RBP21.32■■□□□ 1
COL11A2-204ENST00000395194 SEC24BO95487 1268 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 EFEMP2O95967 443 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 GBP2P32456 591 aaPredicted RBP21.32■■□□□ 1
COL11A2-204ENST00000395194 GRIK3Q13003 919 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 SAFBQ15424 915 aaKnown RBP eCLIP21.32■■□□□ 1
COL11A2-204ENST00000395194 ZNF174Q15697 407 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 C15orf39Q6ZRI6 1047 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 FLCNQ8NFG4 579 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 HASPINQ8TF76 798 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 RIN2Q8WYP3 895 aaPredicted RBP21.32■■□□□ 1
COL11A2-204ENST00000395194 BSNDQ8WZ55 320 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 PAAF1Q9BRP4 392 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 RXFP1Q9HBX9 757 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 POLD4Q9HCU8 107 aa21.32■■□□□ 1
COL11A2-204ENST00000395194 PTPRZ1P23471 2315 aaPredicted RBP21.32■■□□□ 1
COL11A2-204ENST00000395194 VWA8A3KMH1 1905 aa21.31■■□□□ 1
COL11A2-204ENST00000395194 A0A1B0GUA9 196 aa21.31■■□□□ 1
COL11A2-204ENST00000395194 CASTOR2A6NHX0 329 aa21.31■■□□□ 1
COL11A2-204ENST00000395194 GALR2O43603 387 aaPredicted RBP21.31■■□□□ 1
COL11A2-204ENST00000395194 ZBTB8OSQ8IWT0 167 aa21.31■■□□□ 1
COL11A2-204ENST00000395194 KCNK12Q9HB15 430 aa21.31■■□□□ 1
COL11A2-204ENST00000395194 TUFT1Q9NNX1 390 aa21.31■■□□□ 1
COL11A2-204ENST00000395194 ADAM28Q9UKQ2 775 aa21.31■■□□□ 1
COL11A2-204ENST00000395194 CLUHO75153 1309 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 RIF1Q5UIP0 2472 aaKnown RBP21.3■■□□□ 1
COL11A2-204ENST00000395194 NARSO43776 548 aaKnown RBP21.3■■□□□ 1
COL11A2-204ENST00000395194 XRCC6P12956 609 aaKnown RBP eCLIP21.3■■□□□ 1
COL11A2-204ENST00000395194 TDGQ13569 410 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 USP41Q3LFD5 358 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 ASTLQ6HA08 431 aaPredicted RBP21.3■■□□□ 1
COL11A2-204ENST00000395194 PRSS55Q6UWB4 352 aaPredicted RBP21.3■■□□□ 1
COL11A2-204ENST00000395194 MCPH1Q8NEM0 835 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 CMASQ8NFW8 434 aaPredicted RBP21.3■■□□□ 1
COL11A2-204ENST00000395194 RSAD2Q8WXG1 361 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 SMG7Q92540 1137 aaKnown RBP21.3■■□□□ 1
COL11A2-204ENST00000395194 C8orf76Q96K31 380 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 CXCL16Q9H2A7 254 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 CHST7Q9NS84 486 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 PRMT7Q9NVM4 692 aaPredicted RBP21.3■■□□□ 1
COL11A2-204ENST00000395194 SNTG2Q9NY99 539 aa21.3■■□□□ 1
COL11A2-204ENST00000395194 TGM5O43548 720 aa21.29■■□□□ 1
COL11A2-204ENST00000395194 GFRA3O60609 400 aa21.29■■□□□ 1
COL11A2-204ENST00000395194 TADA2AO75478 443 aa21.29■■□□□ 1
COL11A2-204ENST00000395194 EDN1P05305 212 aa21.29■■□□□ 1
COL11A2-204ENST00000395194 OR52Z1P0C646 297 aa21.29■■□□□ 1
COL11A2-204ENST00000395194 CDCA2Q69YH5 1023 aaPredicted RBP21.29■■□□□ 1
COL11A2-204ENST00000395194 CWF19L1Q69YN2 538 aaKnown RBP21.29■■□□□ 1
COL11A2-204ENST00000395194 ELMSAN1Q6PJG2 1045 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms