RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SNTG2Q9NY99 539 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 USP25Q9UHP3 1055 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 MYH11P35749 1972 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 GCNT3O95395 438 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 PROZP22891 400 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 MLH1P40692 756 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 KCNA1Q09470 495 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 EPC2Q52LR7 807 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 NOMO2Q5JPE7 1267 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 SPOUT1Q5T280 376 aaKnown RBP21.84■■□□□ 1.09
SNCA-203ENST00000394986 MPZL3Q6UWV2 235 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 KRBA2Q6ZNG9 492 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 MAP4K3Q8IVH8 894 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 FMR1NBQ8N0W7 255 aaPredicted RBP21.84■■□□□ 1.09
SNCA-203ENST00000394986 LRRC43Q8N309 656 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 ST6GALNAC4Q9H4F1 302 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 CWH43Q9H720 699 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 OLFML3Q9NRN5 406 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 KLK14Q9P0G3 267 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 PARP2Q9UGN5 583 aa21.84■■□□□ 1.09
SNCA-203ENST00000394986 HNRNPDLO14979 420 aaKnown RBP21.83■■□□□ 1.09
SNCA-203ENST00000394986 PPP1R37O75864 691 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 CSPP1Q1MSJ5 1256 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 DCAF4L1Q3SXM0 396 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 SLC39A4Q6P5W5 647 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 UNC13DQ70J99 1090 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 FBXO22Q8NEZ5 403 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 GAD1Q99259 594 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 TCHPQ9BT92 498 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 STRA6Q9BX79 667 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 HAPLN2Q9GZV7 340 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 CXCL16Q9H2A7 254 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 TBC1D13Q9NVG8 400 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 GDAQ9Y2T3 454 aa21.83■■□□□ 1.09
SNCA-203ENST00000394986 FNDC1Q4ZHG4 1894 aaPredicted RBP21.82■■□□□ 1.08
SNCA-203ENST00000394986 TISP43B9A030 160 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 B4GALT3O60512 393 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 TOM1L1O75674 476 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 POMCP01189 267 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 BMPR1AP36894 532 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 PBX3P40426 434 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 LIG4P49917 911 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 OSTNP61366 133 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 SNW1Q13573 536 aaKnown RBP21.82■■□□□ 1.08
SNCA-203ENST00000394986 ADGRE1Q14246 886 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 ZPBP2Q6X784 338 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 TMEM87AQ8NBN3 555 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 SLC17A8Q8NDX2 589 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 ENGASEQ8NFI3 743 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 MIOSQ9NXC5 875 aa21.82■■□□□ 1.08
SNCA-203ENST00000394986 ARL5CA6NH57 179 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 ANKRD63C9JTQ0 380 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 KLRC4O43908 158 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 RECQL4O94761 1208 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 MATR3P43243 847 aaKnown RBP eCLIP21.81■■□□□ 1.08
SNCA-203ENST00000394986 SCNN1GP51170 649 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 FAM160A1Q05DH4 1040 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 EHHADHQ08426 723 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 NOLC1Q14978 699 aaKnown RBP eCLIP21.81■■□□□ 1.08
SNCA-203ENST00000394986 SEZ6Q53EL9 994 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 FAM26FQ5R3K3 315 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 HACE1Q8IYU2 909 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 MRPL9Q9BYD2 267 aaKnown RBP21.81■■□□□ 1.08
SNCA-203ENST00000394986 GBP3Q9H0R5 595 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 UBN1Q9NPG3 1134 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 GIT1Q9Y2X7 761 aa21.81■■□□□ 1.08
SNCA-203ENST00000394986 GTPBP6O43824 516 aaPredicted RBP21.8■■□□□ 1.08
SNCA-203ENST00000394986 LPXNO60711 386 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 PRPF6O94906 941 aaKnown RBP21.8■■□□□ 1.08
SNCA-203ENST00000394986 PIGRP01833 764 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 MCF2P10911 925 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 SCP2P22307 547 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 L1TD1Q5T7N2 865 aaKnown RBP21.8■■□□□ 1.08
SNCA-203ENST00000394986 THNSL1Q8IYQ7 743 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 COLGALT1Q8NBJ5 622 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 URGCPQ8TCY9 931 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 SAMD11Q96NU1 681 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 PVALEFA0A1B0GWK0 134 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 ZC3H11AO75152 810 aaKnown RBP eCLIP21.8■■□□□ 1.08
SNCA-203ENST00000394986 NR1I2O75469 434 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 RNASELQ05823 741 aaKnown RBP21.8■■□□□ 1.08
SNCA-203ENST00000394986 MCL1Q07820 350 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 APBB1IPQ7Z5R6 666 aaPredicted RBP21.8■■□□□ 1.08
SNCA-203ENST00000394986 ZNF280BQ86YH2 543 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 GSTCDQ8NEC7 633 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 HVCN1Q96D96 273 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 ACCSQ96QU6 501 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 DNAJB4Q9UDY4 337 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 PLAGL2Q9UPG8 496 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 RWDD3Q9Y3V2 267 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 PCDHB13Q9Y5F0 798 aa21.8■■□□□ 1.08
SNCA-203ENST00000394986 COL4A4P53420 1690 aaPredicted RBP21.79■■□□□ 1.08
SNCA-203ENST00000394986 C5orf67F2Z3F1 127 aa21.79■■□□□ 1.08
SNCA-203ENST00000394986 INPPL1O15357 1258 aa21.79■■□□□ 1.08
SNCA-203ENST00000394986 CLDN3O15551 220 aa21.79■■□□□ 1.08
SNCA-203ENST00000394986 PRPF40AO75400 957 aaKnown RBP21.79■■□□□ 1.08
SNCA-203ENST00000394986 DDHD2O94830 711 aa21.79■■□□□ 1.08
SNCA-203ENST00000394986 IGFBP4P22692 258 aa21.79■■□□□ 1.08
SNCA-203ENST00000394986 ABCD1P33897 745 aa21.79■■□□□ 1.08
SNCA-203ENST00000394986 GRM5P41594 1212 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms