RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RHOBTB2Q9BYZ6 727 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 CSRNP2Q9H175 543 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 PIDD1Q9HB75 910 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 XPNPEP1Q9NQW7 623 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 GJB4Q9NTQ9 266 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 EPS15L1Q9UBC2 864 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 CA14Q9ULX7 337 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 DCHS1Q96JQ0 3298 aa23.51■■□□□ 1.35
TRAF4-203ENST00000394925 DTNBO60941 627 aa23.51■■□□□ 1.35
TRAF4-203ENST00000394925 PCBP1Q15365 356 aaKnown RBP eCLIP23.51■■□□□ 1.354e-7■■■■■ 32.7
TRAF4-203ENST00000394925 GLYCTKQ8IVS8 523 aa23.51■■□□□ 1.35
TRAF4-203ENST00000394925 OXER1Q8TDS5 423 aa23.51■■□□□ 1.35
TRAF4-203ENST00000394925 ZNF707Q96C28 371 aaPredicted RBP23.51■■□□□ 1.35
TRAF4-203ENST00000394925 NAP1L4Q99733 375 aaKnown RBP23.51■■□□□ 1.35
TRAF4-203ENST00000394925 TRIM6Q9C030 488 aaPredicted RBP23.51■■□□□ 1.35
TRAF4-203ENST00000394925 CHST7Q9NS84 486 aa23.51■■□□□ 1.35
TRAF4-203ENST00000394925 SPIRE1Q08AE8 756 aa23.5■■□□□ 1.35
TRAF4-203ENST00000394925 TFDP1Q14186 410 aa23.5■■□□□ 1.35
TRAF4-203ENST00000394925 HDAC7Q8WUI4 952 aa23.5■■□□□ 1.35
TRAF4-203ENST00000394925 GPR62Q9BZJ7 368 aa23.5■■□□□ 1.35
TRAF4-203ENST00000394925 NT5C3AQ9H0P0 336 aa23.5■■□□□ 1.35
TRAF4-203ENST00000394925 NXF3Q9H4D5 531 aaKnown RBP23.5■■□□□ 1.35
TRAF4-203ENST00000394925 PLEKHA4Q9H4M7 779 aa23.5■■□□□ 1.35
TRAF4-203ENST00000394925 PDRG1Q9NUG6 133 aa23.5■■□□□ 1.35
TRAF4-203ENST00000394925 GIT1Q9Y2X7 761 aa23.5■■□□□ 1.35
TRAF4-203ENST00000394925 TGM5O43548 720 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 CDKL5O76039 1030 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 SLITRK3O94933 977 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 BAG4O95429 457 aaKnown RBP23.49■■□□□ 1.35
TRAF4-203ENST00000394925 SRFP11831 508 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 XBP1P17861 261 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 ARF4P18085 180 aaPredicted RBP23.49■■□□□ 1.35
TRAF4-203ENST00000394925 AKAP5P24588 427 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 ID4P47928 161 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 MBTD1Q05BQ5 628 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 SCRN1Q12765 414 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 AMHR2Q16671 573 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 FUT10Q6P4F1 479 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 SLFN12Q8IYM2 578 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 HACE1Q8IYU2 909 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 ASAP3Q8TDY4 903 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 RABGGTAQ92696 567 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 NXPE3Q969Y0 559 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 TM6SF1Q9BZW5 370 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 TBC1D17Q9HA65 648 aa23.49■■□□□ 1.35
TRAF4-203ENST00000394925 RPL17P18621 184 aaKnown RBP23.48■■□□□ 1.35
TRAF4-203ENST00000394925 CAPSQ13938 189 aa23.48■■□□□ 1.35
TRAF4-203ENST00000394925 USP41Q3LFD5 358 aa23.48■■□□□ 1.35
TRAF4-203ENST00000394925 EARS2Q5JPH6 523 aaKnown RBP23.48■■□□□ 1.35
TRAF4-203ENST00000394925 GET4Q7L5D6 327 aaPredicted RBP23.48■■□□□ 1.35
TRAF4-203ENST00000394925 CDR2LQ86X02 465 aaPredicted RBP23.48■■□□□ 1.35
TRAF4-203ENST00000394925 IFNLR1Q8IU57 520 aaPredicted RBP23.48■■□□□ 1.35
TRAF4-203ENST00000394925 KCNG4Q8TDN1 519 aa23.48■■□□□ 1.35
TRAF4-203ENST00000394925 GPR152Q8TDT2 470 aa23.48■■□□□ 1.35
TRAF4-203ENST00000394925 RIN2Q8WYP3 895 aaPredicted RBP23.48■■□□□ 1.35
TRAF4-203ENST00000394925 EIF2AK1Q9BQI3 630 aaKnown RBP23.48■■□□□ 1.35
TRAF4-203ENST00000394925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.48■■□□□ 1.35
TRAF4-203ENST00000394925 KLK14Q9P0G3 267 aa23.48■■□□□ 1.35
TRAF4-203ENST00000394925 DOCK6Q96HP0 2047 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 FAM205CA6NFA0 338 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 B4GALT5O43286 388 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 LAMP2P13473 410 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 POU5F1BQ06416 359 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 GSTCDQ8NEC7 633 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 ST13P5Q8NFI4 369 aaPredicted RBP23.47■■□□□ 1.35
TRAF4-203ENST00000394925 PRKD2Q9BZL6 878 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 ZDHHC7Q9NXF8 308 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.47■■□□□ 1.356e-10■□□□□ 8.2
TRAF4-203ENST00000394925 FNIP2Q9P278 1114 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 ADAM28Q9UKQ2 775 aa23.47■■□□□ 1.35
TRAF4-203ENST00000394925 EPB41L2O43491 1005 aaKnown RBP23.46■■□□□ 1.35
TRAF4-203ENST00000394925 FRYLO94915 3013 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 PAPLNO95428 1278 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 NPTXRO95502 500 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 C1RP00736 705 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 ARL2P36404 184 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 SPECC1Q5M775 1068 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 LILRA6Q6PI73 481 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 POTEGQ6S5H5 508 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 PARP2Q9UGN5 583 aa23.46■■□□□ 1.35
TRAF4-203ENST00000394925 DMXL1Q9Y485 3027 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 STK36Q9NRP7 1315 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 TADA2AO75478 443 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 DGAT1O75907 488 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 DCNP07585 359 aaKnown RBP23.45■■□□□ 1.34
TRAF4-203ENST00000394925 GLRA2P23416 452 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 SLC27A1Q6PCB7 646 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 ERMP1Q7Z2K6 904 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 CCDC43Q96MW1 224 aaKnown RBP23.45■■□□□ 1.34
TRAF4-203ENST00000394925 ANKEF1Q9NU02 776 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 CACNG4Q9UBN1 327 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 R4GN57 208 aa23.45■■□□□ 1.34
TRAF4-203ENST00000394925 LMNAP02545 664 aaKnown RBP23.44■■□□□ 1.34
TRAF4-203ENST00000394925 CREMQ03060 361 aa23.44■■□□□ 1.34
TRAF4-203ENST00000394925 GRIK3Q13003 919 aa23.44■■□□□ 1.34
TRAF4-203ENST00000394925 NR5A1Q13285 461 aa23.44■■□□□ 1.34
TRAF4-203ENST00000394925 HTR4Q13639 388 aa23.44■■□□□ 1.34
TRAF4-203ENST00000394925 PRSS55Q6UWB4 352 aaPredicted RBP23.44■■□□□ 1.34
TRAF4-203ENST00000394925 GPR65Q8IYL9 337 aa23.44■■□□□ 1.34
TRAF4-203ENST00000394925 HSD17B14Q9BPX1 270 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms