RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LRWD1Q9UFC0 647 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 CNTNAP2Q9UHC6 1331 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 ARHGEF35A5YM69 484 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 ABLIM1O14639 778 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 PTGESO14684 152 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 ERLIN2O94905 339 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 CNPP09543 421 aaKnown RBP9.8□□□□□ -0.84
ATG4A-205ENST00000394892 ATP2C1P98194 919 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-205ENST00000394892 RNASELQ05823 741 aaKnown RBP9.8□□□□□ -0.84
ATG4A-205ENST00000394892 SIGLEC14Q08ET2 396 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 CUL4AQ13619 759 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 SMC1AQ14683 1233 aaKnown RBP9.8□□□□□ -0.84
ATG4A-205ENST00000394892 PCBP1Q15365 356 aaKnown RBP eCLIP9.8□□□□□ -0.84
ATG4A-205ENST00000394892 KIAA0319Q5VV43 1072 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 C1orf186Q6ZWK4 172 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 MCPH1Q8NEM0 835 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 SNX29Q8TEQ0 813 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 TMEM169Q96HH4 297 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 RPGRIP1Q96KN7 1286 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 B3GALT6Q96L58 329 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 SNX27Q96L92 541 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 KLHL5Q96PQ7 755 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 TMEM175Q9BSA9 504 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 GPR62Q9BZJ7 368 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 GIT1Q9Y2X7 761 aa9.8□□□□□ -0.84
ATG4A-205ENST00000394892 PRG3Q9Y2Y8 225 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-205ENST00000394892 TRIOO75962 3097 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.79□□□□□ -0.84
ATG4A-205ENST00000394892 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 ACKR2O00590 384 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 ALDH2P05091 517 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 SSBP05455 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
ATG4A-205ENST00000394892 PRKCBP05771 671 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 MUTP22033 750 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 PRPHP41219 470 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 NAMPTP43490 491 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 HYIQ5T013 277 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 MCTP1Q6DN14 999 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 RINT1Q6NUQ1 792 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 SLC27A1Q6PCB7 646 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 CD300LGQ6UXG3 332 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 TMEM130Q8N3G9 435 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 CNNM3Q8NE01 707 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 PRSS33Q8NF86 280 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 ERMNQ8TAM6 284 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 URGCPQ8TCY9 931 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 RSPH1Q8WYR4 309 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 POMKQ9H5K3 350 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 PTPRHQ9HD43 1115 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 SNTG2Q9NY99 539 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 NOL7Q9UMY1 257 aaKnown RBP9.79□□□□□ -0.84
ATG4A-205ENST00000394892 FAN1Q9Y2M0 1017 aa9.79□□□□□ -0.84
ATG4A-205ENST00000394892 ARID2Q68CP9 1835 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 NPHP3-ACAD11A0A0J9YXS1 232 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 HIP1RO75146 1068 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 SP100P23497 879 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-205ENST00000394892 OR1G1P47890 313 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 NPTX2P47972 431 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 CLCN4P51793 760 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 NUBP1P53384 320 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
ATG4A-205ENST00000394892 TMEM119Q4V9L6 283 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 ARSHQ5FYA8 562 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 RARS2Q5T160 578 aaKnown RBP9.78□□□□□ -0.84
ATG4A-205ENST00000394892 IER5LQ5T953 404 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 CEP120Q8N960 986 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 ATOH1Q92858 354 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-205ENST00000394892 PRIMPOLQ96LW4 560 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 CCDC43Q96MW1 224 aaKnown RBP9.78□□□□□ -0.84
ATG4A-205ENST00000394892 PLIN2Q99541 437 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 HERC2P3Q9BVR0 1158 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 BACH2Q9BYV9 841 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 ADAM7Q9H2U9 754 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 RXFP1Q9HBX9 757 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 CHST7Q9NS84 486 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 PRMT7Q9NVM4 692 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-205ENST00000394892 ARHGAP28Q9P2N2 729 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 KANSL3Q9P2N6 904 aa9.78□□□□□ -0.84
ATG4A-205ENST00000394892 C2CD4DB7Z1M9 353 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 TEX28O15482 410 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 GFRA3O60609 400 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 RECQL4O94761 1208 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 SOD2P04179 222 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 MYBP10242 640 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 HOXB8P17481 243 aaPredicted RBP9.77□□□□□ -0.85
ATG4A-205ENST00000394892 LIG1P18858 919 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 SLC12A3P55017 1021 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 PEX3P56589 373 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 FOXK2Q01167 660 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 DSG1Q02413 1049 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 PRPF4BQ13523 1007 aaKnown RBP9.77□□□□□ -0.85
ATG4A-205ENST00000394892 BMS1Q14692 1282 aaKnown RBP9.77□□□□□ -0.85
ATG4A-205ENST00000394892 PTPN21Q16825 1174 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 RILPL1Q5EBL4 403 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 HAUS3Q68CZ6 603 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 DTHD1Q6ZMT9 781 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 USP49Q70CQ1 688 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 CASP10Q92851 521 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 ZBTB45Q96K62 511 aaPredicted RBP9.77□□□□□ -0.85
ATG4A-205ENST00000394892 RPS6KC1Q96S38 1066 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms