RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 IFT74Q96LB3 600 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 NOCTQ9UK39 431 aaKnown RBP20.09■□□□□ 0.81
SIL1-202ENST00000394817 TTC7AQ9ULT0 858 aaPredicted RBP20.09■□□□□ 0.81
SIL1-202ENST00000394817 ZSCAN5CA6NGD5 496 aaPredicted RBP20.08■□□□□ 0.81
SIL1-202ENST00000394817 CCDC188H7C350 402 aa20.08■□□□□ 0.81
SIL1-202ENST00000394817 HNRNPDLO14979 420 aaKnown RBP20.08■□□□□ 0.81
SIL1-202ENST00000394817 PHACTR2O75167 634 aa20.08■□□□□ 0.81
SIL1-202ENST00000394817 CARSP49589 748 aaKnown RBP20.08■□□□□ 0.81
SIL1-202ENST00000394817 MFAP3P55082 362 aa20.08■□□□□ 0.81
SIL1-202ENST00000394817 GADL1Q6ZQY3 521 aa20.08■□□□□ 0.81
SIL1-202ENST00000394817 TAS1R3Q7RTX0 852 aa20.08■□□□□ 0.81
SIL1-202ENST00000394817 RPUSD2Q8IZ73 545 aaKnown RBP20.08■□□□□ 0.81
SIL1-202ENST00000394817 GPD1LQ8N335 351 aa20.08■□□□□ 0.81
SIL1-202ENST00000394817 PPM1KQ8N3J5 372 aa20.08■□□□□ 0.81
SIL1-202ENST00000394817 CCDC127Q96BQ5 260 aa20.08■□□□□ 0.81
SIL1-202ENST00000394817 POLR3FQ9H1D9 316 aaPredicted RBP20.08■□□□□ 0.81
SIL1-202ENST00000394817 DIS3Q9Y2L1 958 aaKnown RBP20.08■□□□□ 0.81
SIL1-202ENST00000394817 ATG7O95352 703 aa20.08■□□□□ 0.8
SIL1-202ENST00000394817 NF2P35240 595 aa20.08■□□□□ 0.8
SIL1-202ENST00000394817 SP2Q02086 613 aa20.08■□□□□ 0.8
SIL1-202ENST00000394817 EIF1ADQ8N9N8 165 aaKnown RBP20.08■□□□□ 0.8
SIL1-202ENST00000394817 FBXL13Q8NEE6 735 aa20.08■□□□□ 0.8
SIL1-202ENST00000394817 COG5Q9UP83 839 aa20.08■□□□□ 0.8
SIL1-202ENST00000394817 ESYT3A0FGR9 886 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 DDX3YO15523 660 aaKnown RBP20.07■□□□□ 0.8
SIL1-202ENST00000394817 POTEJP0CG39 1038 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 EMC2Q15006 297 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 LBX2Q6XYB7 198 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 KLHL7Q8IXQ5 586 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 ANKRD13AQ8IZ07 590 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 HELQQ8TDG4 1101 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 CASKIN2Q8WXE0 1202 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 FAM204AQ9H8W3 233 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 KCNG1Q9UIX4 513 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 NFU1Q9UMS0 254 aa20.07■□□□□ 0.8
SIL1-202ENST00000394817 MAFBQ9Y5Q3 323 aaPredicted RBP20.07■□□□□ 0.8
SIL1-202ENST00000394817 SYNGAP1Q96PV0 1343 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 BHMG1C9JSJ3 638 aaPredicted RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 RTN2O75298 545 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 SGPL1O95470 568 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 FTLP02792 175 aaPredicted RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 GZMAP12544 262 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 CHRNB2P17787 502 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 MTERF2Q49AM1 385 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 C11orf63Q6NUN7 778 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 NOP9Q86U38 636 aaKnown RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 TSEN2Q8NCE0 465 aaKnown RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 ZNF526Q8TF50 670 aaPredicted RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 RIN2Q8WYP3 895 aaPredicted RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.06■□□□□ 0.89e-8■■■■■ 72
SIL1-202ENST00000394817 NT5C1BQ96P26 610 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 POP1Q99575 1024 aaKnown RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 TOPORSQ9NS56 1045 aaPredicted RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 RAB20Q9NX57 234 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 A0A0G2JLL6 359 aaPredicted RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 ERICH4A6NGS2 130 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 SCP2P22307 547 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 USP8P40818 1118 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 LMAN1P49257 510 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 ALDH5A1P51649 535 aaPredicted RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 ALS2CLQ60I27 953 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 CYFIP1Q7L576 1253 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 PRRT2Q7Z6L0 340 aaPredicted RBP20.06■□□□□ 0.8
SIL1-202ENST00000394817 ANKRD35Q8N283 1001 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 MREGQ8N565 214 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 TAS1R2Q8TE23 839 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 SH3GL2Q99962 352 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 CARD9Q9H257 536 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 ZNF302Q9NR11 478 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 FBXO40Q9UH90 709 aa20.06■□□□□ 0.8
SIL1-202ENST00000394817 KRIT1O00522 736 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 SORBS3O60504 671 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 OATP04181 439 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 ATP4AP20648 1035 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 POLGP54098 1239 aaPredicted RBP20.05■□□□□ 0.8
SIL1-202ENST00000394817 CNTN2Q02246 1040 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 PRPF4BQ13523 1007 aaKnown RBP20.05■□□□□ 0.8
SIL1-202ENST00000394817 DCAF12L1Q5VU92 463 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 SV2AQ7L0J3 742 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 ERO1BQ86YB8 467 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 RIOX2Q8IUF8 465 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 WHAMMQ8TF30 809 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 BICD1Q96G01 975 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 PCDHB18PQ96TA0 734 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 AP1M1Q9BXS5 423 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 SLITRK6Q9H5Y7 841 aa20.05■□□□□ 0.8
SIL1-202ENST00000394817 DHX33Q9H6R0 707 aaKnown RBP20.05■□□□□ 0.8
SIL1-202ENST00000394817 CCDC66A2RUB6 948 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 SPDYE5A6NIY4 337 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 CYP26A1O43174 497 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 SART1O43290 800 aaKnown RBP20.04■□□□□ 0.8
SIL1-202ENST00000394817 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 MTA2O94776 668 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 GPC5P78333 572 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 SLC47A2Q86VL8 602 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 IFT81Q8WYA0 676 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 KIAA1586Q9HCI6 787 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 BTBD7Q9P203 1132 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 IGKV6D-21A0A0A0MT36 114 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 IQCA1LA6NCM1 817 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms