RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CNGA2Q16280 664 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 STRIP1Q5VSL9 837 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 PPP1R2P3Q6NXS1 205 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 RNF207Q6ZRF8 634 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 ENOSF1Q7L5Y1 443 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 NIPA1Q7RTP0 329 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 PTF1AQ7RTS3 328 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 SLC51AQ86UW1 340 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 LRRC34Q8IZ02 419 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 CD101Q93033 1021 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 SNF8Q96H20 258 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 PRMT1Q99873 361 aaKnown RBP10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 SEMA4AQ9H3S1 761 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 RGS17Q9UGC6 210 aaPredicted RBP10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 HERC5Q9UII4 1024 aaKnown RBP10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 SERPINA10Q9UK55 444 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 USP15Q9Y4E8 981 aaPredicted RBP10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 ATRNL1Q5VV63 1379 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 RBBP6Q7Z6E9 1792 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 POLRMTO00411 1230 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 PLA2G6O60733 806 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 TCEA3O75764 348 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 CFBP00751 764 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 VIL1P09327 827 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 MYBL1P10243 752 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 RBM5P52756 815 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 MCCD1P59942 119 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 AUHQ13825 339 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 RASA3Q14644 834 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 COG2Q14746 738 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 HIBCHQ6NVY1 386 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 ARHGEF18Q6ZSZ5 1173 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 FAM160B2Q86V87 743 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 FAM71AQ8IYT1 594 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 RIBC1Q8N443 379 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 ELAC2Q9BQ52 826 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 LXNQ9BS40 222 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 WDR18Q9BV38 432 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 TRIM7Q9C029 511 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 CCDC113Q9H0I3 377 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 ADAM7Q9H2U9 754 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 TAS2R14Q9NYV8 317 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 TRPC5Q9UL62 973 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 ACTL7BQ9Y614 415 aa10.77□□□□□ -0.69
UBE2D3-208ENST00000394803 SMIM23A6NLE4 172 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 OPLAHO14841 1288 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 SNX3O60493 162 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 P4HBP07237 508 aaKnown RBP10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 PLS3P13797 630 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 GTF2H1P32780 548 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 CENPCQ03188 943 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 NR1H3Q13133 447 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 SGO2Q562F6 1265 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 PADI6Q6TGC4 694 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 PPP1R21Q6ZMI0 780 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 SIAH1Q8IUQ4 282 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 EPS8L1Q8TE68 723 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 ZNF653Q96CK0 615 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 NUP85Q9BW27 656 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.76□□□□□ -0.696e-9■□□□□ 11.3
UBE2D3-208ENST00000394803 ARL2BPQ9Y2Y0 163 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 DDTLA6NHG4 134 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 FSCN2O14926 492 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 ATP2C2O75185 946 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 ABCD1P33897 745 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 CETN2P41208 172 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 CDR2Q01850 454 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 TCP10Q12799 353 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 PTK6Q13882 451 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 MIER3Q7Z3K6 550 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 SLC20A1Q8WUM9 679 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 KRT35Q92764 455 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 UNC45AQ9H3U1 944 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 NOD2Q9HC29 1040 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 BATF3Q9NR55 127 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 NKIRAS1Q9NYS0 192 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 NOCTQ9UK39 431 aaKnown RBP10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 ADAMTSL1Q8N6G6 1762 aa10.76□□□□□ -0.69
UBE2D3-208ENST00000394803 IPO5O00410 1097 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 PYGMP11217 842 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 FGFR4P22455 802 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 COPB2P35606 906 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 SKIV2L2P42285 1042 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 SLC8A3P57103 927 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 IFI35P80217 286 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 KRT17Q04695 432 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 STRN3Q13033 797 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 AOC3Q16853 763 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 DOK7Q18PE1 504 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 KRT39Q6A163 491 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 TTC27Q6P3X3 843 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 B3GNT9Q6UX72 402 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 ZNF677Q86XU0 584 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 CYP2W1Q8TAV3 490 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 EPS8L3Q8TE67 593 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 SHC3Q92529 594 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 ARHGEF2Q92974 986 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms