RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 DIS3L2Q8IYB7 885 aaKnown RBP19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 STAMQ92783 540 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 CPB2Q96IY4 423 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 ZFP42Q96MM3 310 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 CCDC43Q96MW1 224 aaKnown RBP19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 WDR6Q9NNW5 1121 aaKnown RBP19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 TUFT1Q9NNX1 390 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 MAN1C1Q9NR34 630 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 MIOSQ9NXC5 875 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 FNIP2Q9P278 1114 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 PRG3Q9Y2Y8 225 aaPredicted RBP19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 HES2Q9Y543 173 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 TXKP42681 527 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 CREMQ03060 361 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 GRIK3Q13003 919 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 ORC2Q13416 577 aaPredicted RBP19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 TRIM29Q14134 588 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 FAM187BQ17R55 369 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 TAS1R1Q7RTX1 841 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 TMEM105Q8N8V8 129 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 NECAB1Q8N987 351 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 MCPH1Q8NEM0 835 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 ATOH1Q92858 354 aaPredicted RBP19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 NXPE3Q969Y0 559 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 SMOC2Q9H3U7 446 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 DUSP12Q9UNI6 340 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 TDRD15B5MCY1 1934 aaKnown RBP19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 C2orf16Q68DN1 1984 aa19.4■□□□□ 0.7
SNRPA1-202ENST00000394082 C2CD2LO14523 706 aa19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 SPATA31C1P0DKV0 1188 aa19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 USP41Q3LFD5 358 aa19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 CDCA2Q69YH5 1023 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 POLR3FQ9H1D9 316 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 FZD8Q9H461 694 aa19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 NXF3Q9H4D5 531 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 KCNK12Q9HB15 430 aa19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 PRMT7Q9NVM4 692 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 ZDHHC7Q9NXF8 308 aa19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 EPS15L1Q9UBC2 864 aa19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 VPS13AQ96RL7 3174 aa19.39■□□□□ 0.69
SNRPA1-202ENST00000394082 CCDC195A0A1B0GUA6 201 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 GFRA3O60609 400 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 LARGE1O95461 756 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 FUT10Q6P4F1 479 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 FEZF2Q8TBJ5 459 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 PIGOQ8TEQ8 1089 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 NACC1Q96RE7 527 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 POLR3CQ9BUI4 534 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 MFSD1Q9H3U5 465 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 ADAM28Q9UKQ2 775 aa19.38■□□□□ 0.69
SNRPA1-202ENST00000394082 ZFHX2Q9C0A1 2572 aaPredicted RBP19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 H0Y858 1186 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 WNT7AO00755 349 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 B4GALT5O43286 388 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 DTNBO60941 627 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 MUTP22033 750 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 NBL1P41271 181 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 LILRA6Q6PI73 481 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 CATSPER3Q86XQ3 398 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 GPR62Q9BZJ7 368 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 C2orf40Q9H1Z8 148 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 PLXNA3P51805 1871 aa19.37■□□□□ 0.69
SNRPA1-202ENST00000394082 CLUHO75153 1309 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 MTCL1Q9Y4B5 1905 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 POTEMA6NI47 508 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 USO1O60763 962 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 NPTXRO95502 500 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 AOC1P19801 751 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 AKAP5P24588 427 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 RPA1P27694 616 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 ZBTB8OSQ8IWT0 167 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 ZNF707Q96C28 371 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 RTP3Q9BQQ7 232 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 APOL6Q9BWW8 343 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 NT5C3AQ9H0P0 336 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 TMEM60Q9H2L4 133 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 FAM86C1Q9NVL1 165 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 WNT16Q9UBV4 365 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 DMDP11532 3685 aa19.36■□□□□ 0.69
SNRPA1-202ENST00000394082 SF3B1O75533 1304 aaKnown RBP eCLIP19.35■□□□□ 0.696e-7■■■■■ 56
SNRPA1-202ENST00000394082 LRRIQ4A6NIV6 560 aa19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 TGM5O43548 720 aa19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 JAK2O60674 1132 aa19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 N4BP1O75113 896 aaKnown RBP19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 NPR3P17342 541 aa19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 NEK4P51957 841 aa19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 TUSC3Q13454 348 aa19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 SAFBQ15424 915 aaKnown RBP eCLIP19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 CWF19L1Q69YN2 538 aaKnown RBP19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 ERMNQ8TAM6 284 aa19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 SMG7Q92540 1137 aaKnown RBP19.35■□□□□ 0.69
SNRPA1-202ENST00000394082 F8W810 466 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 N4BP3O15049 544 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 TADA2AO75478 443 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 RFPL2O75678 378 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 NEFLP07196 543 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 ATP2B1P20020 1258 aa19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 HSP90AA2PQ14568 343 aaPredicted RBP19.34■□□□□ 0.69
SNRPA1-202ENST00000394082 MAPK6Q16659 721 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms