RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 CTCFP49711 727 aaPredicted RBP24.37■■□□□ 1.49
RARA-202ENST00000394081 RGS9BPQ6ZS82 235 aa24.37■■□□□ 1.49
RARA-202ENST00000394081 ZNF804AQ7Z570 1209 aa24.37■■□□□ 1.49
RARA-202ENST00000394081 ANKRD35Q8N283 1001 aa24.37■■□□□ 1.49
RARA-202ENST00000394081 GDAP1Q8TB36 358 aa24.37■■□□□ 1.49
RARA-202ENST00000394081 SNF8Q96H20 258 aa24.37■■□□□ 1.49
RARA-202ENST00000394081 FAM20AQ96MK3 541 aa24.37■■□□□ 1.49
RARA-202ENST00000394081 POLR3CQ9BUI4 534 aaPredicted RBP24.37■■□□□ 1.49
RARA-202ENST00000394081 DMAC2Q9NW81 257 aa24.37■■□□□ 1.49
RARA-202ENST00000394081 ENO4A6NNW6 628 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 DCTN3O75935 186 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 GZMAP12544 262 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 MYL7Q01449 175 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 GRIK5Q16478 980 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 TSNAXIP1Q2TAA8 658 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 LRRC47Q8N1G4 583 aaKnown RBP24.36■■□□□ 1.49
RARA-202ENST00000394081 CRYGNQ8WXF5 182 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 FAM167BQ9BTA0 163 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 FRMD4BQ9Y2L6 1034 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 PTPN22Q9Y2R2 807 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 COL14A1Q05707 1796 aaKnown RBP24.36■■□□□ 1.49
RARA-202ENST00000394081 MAPK13O15264 365 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 CNGA1P29973 690 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 SLC18A1P54219 525 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 RNF207Q6ZRF8 634 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 VSIG1Q86XK7 387 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 RELL1Q8IUW5 271 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 SLF2Q8IX21 1173 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 ASAP3Q8TDY4 903 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 MAIP1Q8WWC4 291 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 CCDC77Q9BR77 488 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 DNAJC18Q9H819 358 aa24.36■■□□□ 1.49
RARA-202ENST00000394081 CPSF2Q9P2I0 782 aaKnown RBP24.36■■□□□ 1.49
RARA-202ENST00000394081 NKX1-2Q9UD57 310 aaPredicted RBP24.36■■□□□ 1.49
RARA-202ENST00000394081 FSCN2O14926 492 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 GH1P01241 217 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 NR1H3Q13133 447 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 CRAMP1Q96RY5 1269 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 TSC22D3Q99576 134 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 MYLK2Q9H1R3 596 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 UBN1Q9NPG3 1134 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 HNRNPCL1O60812 293 aaKnown RBP24.35■■□□□ 1.49
RARA-202ENST00000394081 ALDH3A1P30838 453 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 RAD23BP54727 409 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 RHBDL3P58872 404 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 ROR2Q01974 943 aaKnown RBP24.35■■□□□ 1.49
RARA-202ENST00000394081 PTK6Q13882 451 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 STAT4Q14765 748 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 CBWD6Q4V339 395 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 CBWD3Q5JTY5 395 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 CBWD5Q5RIA9 395 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 STXBP4Q6ZWJ1 553 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 PARD3BQ8TEW8 1205 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 GRK7Q8WTQ7 553 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 ZFAND2BQ8WV99 257 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 LRRC37BQ96QE4 947 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 SEL1LQ9UBV2 794 aa24.35■■□□□ 1.49
RARA-202ENST00000394081 FOCADQ5VW36 1801 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 ZNF831Q5JPB2 1677 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 DPPA5A6NC42 116 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 RSPH10B2B2RC85 870 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 FOXN3O00409 490 aaPredicted RBP24.34■■□□□ 1.49
RARA-202ENST00000394081 RSPH10BP0C881 870 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 KRT17Q04695 432 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 NBPF20Q3BBV1 942 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 HS2ST1Q7LGA3 356 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 KCNV2Q8TDN2 545 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 CDCA7Q9BWT1 371 aaPredicted RBP24.34■■□□□ 1.49
RARA-202ENST00000394081 COL24A1Q17RW2 1714 aa24.34■■□□□ 1.49
RARA-202ENST00000394081 TCRBV7S2A1N4TA0A589 114 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 MPHOSPH10O00566 681 aaKnown RBP24.33■■□□□ 1.49
RARA-202ENST00000394081 PCK1P35558 622 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 PAPOLAP51003 745 aaKnown RBP24.33■■□□□ 1.49
RARA-202ENST00000394081 GABPAQ06546 454 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 KCNA1Q09470 495 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 MYBPC2Q14324 1141 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 MESDQ14696 234 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 TBC1D9BQ66K14 1250 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 CEP128Q6ZU80 1094 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 FAM13CQ8NE31 585 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 RUSC1Q9BVN2 902 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 SLAIN2Q9P270 581 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 THRAP3Q9Y2W1 955 aaKnown RBP24.33■■□□□ 1.49
RARA-202ENST00000394081 RABGAP1Q9Y3P9 1069 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 ASB3Q9Y575 518 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 FAM47DPA6NHR8 397 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 MEIS1O00470 390 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 THAP12O43422 761 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 SORBS3O60504 671 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 CWF19L1Q69YN2 538 aaKnown RBP24.33■■□□□ 1.49
RARA-202ENST00000394081 SLC9A9Q8IVB4 645 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 LMO3Q8TAP4 145 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 ZBTB10Q96DT7 871 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 TRAIPQ9BWF2 469 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 BHMT2Q9H2M3 363 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 EURLQ9NYK6 297 aa24.33■■□□□ 1.49
RARA-202ENST00000394081 SPATA31A5Q5VU36 1347 aa24.33■■□□□ 1.48
RARA-202ENST00000394081 SPATA31A6Q5VVP1 1343 aa24.33■■□□□ 1.48
RARA-202ENST00000394081 MROH7Q68CQ1 1323 aa24.33■■□□□ 1.48
RARA-202ENST00000394081 SPATA31A7Q8IWB4 1347 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms