RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 SIX2Q9NPC8 291 aa12.62□□□□□ -0.39
R3HDM2-203ENST00000393811 CPSF2Q9P2I0 782 aaKnown RBP12.62□□□□□ -0.39
R3HDM2-203ENST00000393811 ZNF148Q9UQR1 794 aa12.62□□□□□ -0.39
R3HDM2-203ENST00000393811 CTDP1Q9Y5B0 961 aaPredicted RBP12.62□□□□□ -0.39
R3HDM2-203ENST00000393811 MAPK13O15264 365 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 SGPL1O95470 568 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 ZDHHC24Q6UX98 284 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 PIGWQ7Z7B1 504 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 VPS52Q8N1B4 723 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 ELMO3Q96BJ8 720 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 PWWP2AQ96N64 755 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 SAYSD1Q9NPB0 183 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 RPTORQ8N122 1335 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 GGPS1O95749 300 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 GH1P01241 217 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 MFAP3P55082 362 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 TTC27Q6P3X3 843 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 CRELD2Q6UXH1 353 aaPredicted RBP12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 BZW1Q7L1Q6 419 aaKnown RBP12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 MAIP1Q8WWC4 291 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 STMN2Q93045 179 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 HAO1Q9UJM8 370 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 DCTN4Q9UJW0 460 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 GLI3P10071 1580 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 ANKRD63C9JTQ0 380 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 FAM86B1E9PN63 330 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 RPS6KA4O75676 772 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 UPP2O95045 317 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 FAM86B2P0C5J1 330 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 SATB1Q01826 763 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 BIRC2Q13490 618 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 EPC2Q52LR7 807 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 C4orf33Q8N1A6 199 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 TEKT1Q969V4 418 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 CCDC17Q96LX7 622 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 SERPINB12Q96P63 405 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 TMEM237Q96Q45 408 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 ZNF577Q9BSK1 485 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 AFF2P51816 1311 aa12.61□□□□□ -0.39
R3HDM2-203ENST00000393811 EML1O00423 815 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 TGFB1I1O43294 461 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 VCAM1P19320 739 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 C2CD6Q53TS8 623 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 ANKRD20A2Q5SQ80 823 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 ANKRD20A1Q5TYW2 823 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 ANKRD20A3Q5VUR7 823 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 PHLDB3Q6NSJ2 640 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 KAT5Q92993 513 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 KCNMB3Q9NPA1 279 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 COL18A1P39060 1754 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 F5H6K3 240 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 PPP1R12AO14974 1030 aaPredicted RBP12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 SPATA31C1P0DKV0 1188 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 JAM2P57087 298 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 RHBDL3P58872 404 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 SPDYCQ5MJ68 293 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 HYIQ5T013 277 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 RBM26Q5T8P6 1007 aaKnown RBP12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 PPFIBP2Q8ND30 876 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 RXFP1Q9HBX9 757 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 GRHL1Q9NZI5 618 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 SLC12A4Q9UP95 1085 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 CDH16O75309 829 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 PSEN1P49768 467 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 IRX1P78414 480 aaPredicted RBP12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 PPATQ06203 517 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 SYDE2Q5VT97 1194 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 CYFIP1Q7L576 1253 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 MIER3Q7Z3K6 550 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 SCYL3Q8IZE3 742 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 ZBTB10Q96DT7 871 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 NT5C1BQ96P26 610 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 IKBKGQ9Y6K9 419 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 NCANO14594 1321 aa12.6□□□□□ -0.39
R3HDM2-203ENST00000393811 ITIH2P19823 946 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 ERFP50548 548 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 DRG2P55039 364 aaKnown RBP12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 SPARCL1Q14515 664 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 IZUMO3Q5VZ72 239 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 CPNE8Q86YQ8 564 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 ARHGEF19Q8IW93 802 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 DNAJC18Q9H819 358 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 DDX60Q8IY21 1712 aaKnown RBP12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 ROBO3Q96MS0 1386 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 TROVE2P10155 538 aaKnown RBP eCLIP12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 SSTR3P32745 418 aaPredicted RBP12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 CHKAP35790 457 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 FITM2Q8N6M3 262 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 TSC22D3Q99576 134 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 MKNK1Q9BUB5 465 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 TISP43B9A030 160 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 TTC4O95801 387 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms