RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 FXR2P51116 673 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 SIGLEC14Q08ET2 396 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 FAM187BQ17R55 369 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 KIAA0319Q5VV43 1072 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 TMC5Q6UXY8 1006 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 FAM184AQ8NB25 1140 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 TMEM87AQ8NBN3 555 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 PBXIP1Q96AQ6 731 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 MFSD14AQ96MC6 490 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 HERC2P3Q9BVR0 1158 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 TRIM6Q9C030 488 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 CCDC113Q9H0I3 377 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 MRPL17Q9NRX2 175 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 CACNG4Q9UBN1 327 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 PCDHB6Q9Y5E3 794 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 KLRC2P26717 231 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 IL17AQ16552 155 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 IER5LQ5T953 404 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 CABP7Q86V35 215 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 PPFIBP1Q86W92 1011 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 ERMNQ8TAM6 284 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 RABGGTAQ92696 567 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 B3GALT6Q96L58 329 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 RIPOR3Q96MK2 946 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 RPS6KC1Q96S38 1066 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 PAAF1Q9BRP4 392 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 EMILIN2Q9BXX0 1053 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 GPR62Q9BZJ7 368 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 SMOC2Q9H3U7 446 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 PDZD7Q9H5P4 517 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 PRMT7Q9NVM4 692 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 STK39Q9UEW8 545 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 NR2E1Q9Y466 385 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 TRIP11Q15643 1979 aa20.19■□□□□ 0.82
PDLIM7-205ENST00000393551 MTCL1Q9Y4B5 1905 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 TEX28O15482 410 aa20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 ATAT1Q5SQI0 421 aa20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 GPR149Q86SP6 731 aa20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 IGSF22Q8N9C0 903 aa20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 KIFC3Q9BVG8 833 aa20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 RXFP1Q9HBX9 757 aa20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 CHST7Q9NS84 486 aa20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 USP34Q70CQ2 3546 aa20.18■□□□□ 0.82
PDLIM7-205ENST00000393551 ARHGEF35A5YM69 484 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 MUTP22033 750 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 CCT6AP40227 531 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 DSG1Q02413 1049 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 PTGDRQ13258 359 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 KREMEN2Q8NCW0 462 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 KCNH6Q9H252 994 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 BHMT2Q9H2M3 363 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 SFXN1Q9H9B4 322 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 LRWD1Q9UFC0 647 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 PARP2Q9UGN5 583 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 ZMYM2Q9UBW7 1377 aa20.17■□□□□ 0.82
PDLIM7-205ENST00000393551 PP2D1A8MPX8 630 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 PTGESO14684 152 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 CD2BP2O95400 341 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 BRD1O95696 1058 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 URODP06132 367 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 ASGR2P07307 311 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 NAMPTP43490 491 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 GLUD2P49448 558 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 NHLH1Q02575 133 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 GRIK3Q13003 919 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 GNL2Q13823 731 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 PDIA5Q14554 519 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 NAB2Q15742 525 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 EEF1DP3Q658K8 133 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 HAUS3Q68CZ6 603 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 ZBTB8OSQ8IWT0 167 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 HACE1Q8IYU2 909 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 SNTG2Q9NY99 539 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 NOL7Q9UMY1 257 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 KIAA1024Q9UPX6 916 aa20.16■□□□□ 0.82
PDLIM7-205ENST00000393551 DOCK6Q96HP0 2047 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 CACNA1HO95180 2353 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 MYO15AQ9UKN7 3530 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 ACKR2O00590 384 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 PDGFBP01127 241 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 PRKCBP05771 671 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 CDC25AP30304 524 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 PRPF4BQ13523 1007 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 MAPK6Q16659 721 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 FUT10Q6P4F1 479 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 ZDHHC14Q8IZN3 488 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 FBXL6Q8N531 539 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 PRSS33Q8NF86 280 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 COLEC11Q9BWP8 271 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 C2orf40Q9H1Z8 148 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 MAN1C1Q9NR34 630 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 DDX19AQ9NUU7 478 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 LIMD1Q9UGP4 676 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 USTQ9Y2C2 406 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 VWA8A3KMH1 1905 aa20.15■□□□□ 0.82
PDLIM7-205ENST00000393551 N4BP3O15049 544 aa20.14■□□□□ 0.81
PDLIM7-205ENST00000393551 MYBP10242 640 aa20.14■□□□□ 0.81
PDLIM7-205ENST00000393551 VCPP55072 806 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-205ENST00000393551 NT5DC1Q5TFE4 455 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms