RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 DCAF17Q5H9S7 520 aaPredicted RBP4.43□□□□□ -1.7
MDM2-208ENST00000393410 PRAMEF14Q5SWL7 426 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 TUBA3EQ6PEY2 450 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 DOK3Q7L591 496 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 FAM83AQ86UY5 434 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 ZFPM1Q8IX07 1006 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 ZNF480Q8WV37 535 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 SLC2A13Q96QE2 648 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 CDC5LQ99459 802 aaKnown RBP4.43□□□□□ -1.7
MDM2-208ENST00000393410 PDCD2LQ9BRP1 358 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 ACE2Q9BYF1 805 aaPredicted RBP4.43□□□□□ -1.7
MDM2-208ENST00000393410 KCNH6Q9H252 994 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 PARPBPQ9NWS1 579 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 SLC5A4Q9NY91 659 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 MCM8Q9UJA3 840 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 ING1Q9UK53 422 aaPredicted RBP4.43□□□□□ -1.7
MDM2-208ENST00000393410 SHROOM4Q9ULL8 1493 aa4.43□□□□□ -1.7
MDM2-208ENST00000393410 GOLGA6L6A8MZA4 724 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 GASTP01350 101 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 MTHFD2P13995 350 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 NR4A1P22736 598 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 GDF5P43026 501 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 KLF1Q13351 362 aaPredicted RBP4.42□□□□□ -1.7
MDM2-208ENST00000393410 VPS72Q15906 364 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 RABL3Q5HYI8 236 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 METTL24Q5JXM2 366 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 RNF187Q5TA31 235 aaPredicted RBP4.42□□□□□ -1.7
MDM2-208ENST00000393410 TRMT2AQ8IZ69 625 aaKnown RBP4.42□□□□□ -1.7
MDM2-208ENST00000393410 FBXO18Q8NFZ0 1043 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 SLC35B2Q8TB61 432 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 HOXB13Q92826 284 aaPredicted RBP4.42□□□□□ -1.7
MDM2-208ENST00000393410 FATE1Q969F0 183 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 PAWRQ96IZ0 340 aaKnown RBP4.42□□□□□ -1.7
MDM2-208ENST00000393410 PUS7LQ9H0K6 701 aaKnown RBP4.42□□□□□ -1.7
MDM2-208ENST00000393410 GREM2Q9H772 168 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 MMRN2Q9H8L6 949 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 GPRC5BQ9NZH0 403 aa4.42□□□□□ -1.7
MDM2-208ENST00000393410 ATRNL1Q5VV63 1379 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 AHRRA9YTQ3 701 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 LEFTY2O00292 366 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 GSPT1P15170 499 aaKnown RBP4.41□□□□□ -1.7
MDM2-208ENST00000393410 CDK11BP21127 795 aaKnown RBP4.41□□□□□ -1.7
MDM2-208ENST00000393410 AGXTP21549 392 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 ZFP36P26651 326 aaKnown RBP4.41□□□□□ -1.7
MDM2-208ENST00000393410 CRHR1P34998 444 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 IARSP41252 1262 aaKnown RBP4.41□□□□□ -1.7
MDM2-208ENST00000393410 MCAMP43121 646 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 EVA1CP58658 441 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 MALLQ13021 153 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 SEPT2Q15019 361 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 ANO4Q32M45 955 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 MUM1L1Q5H9M0 696 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 NECAB2Q7Z6G3 386 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 SYT12Q8IV01 421 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 OR2I1PQ8NGU4 316 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 CCDC8Q9H0W5 538 aaPredicted RBP4.41□□□□□ -1.7
MDM2-208ENST00000393410 PCED1AQ9H1Q7 454 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 ZNF768Q9H5H4 540 aaKnown RBP4.41□□□□□ -1.7
MDM2-208ENST00000393410 ZNF277Q9NRM2 450 aaPredicted RBP4.41□□□□□ -1.7
MDM2-208ENST00000393410 RBM12Q9NTZ6 932 aaKnown RBP4.41□□□□□ -1.7
MDM2-208ENST00000393410 SORCS3Q9UPU3 1222 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 PCDHGA2Q9Y5H1 932 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 GPR45Q9Y5Y3 372 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 WASHC2AQ641Q2 1341 aa4.41□□□□□ -1.7
MDM2-208ENST00000393410 TRIM75PA6NK02 468 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 TBKBP1A7MCY6 615 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 CYR61O00622 381 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 PHF2O75151 1096 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 RPS6KA4O75676 772 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 HSP90B1P14625 803 aaKnown RBP4.4□□□□□ -1.71
MDM2-208ENST00000393410 APOBEC3AP31941 199 aaPredicted RBP4.4□□□□□ -1.71
MDM2-208ENST00000393410 PTPN7P35236 360 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 SREBF1P36956 1147 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 FAM189BP81408 668 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 MTMR1Q13613 665 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 BMT2Q1RMZ1 405 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 FAM47AQ5JRC9 791 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 MBNL2Q5VZF2 373 aaKnown RBP4.4□□□□□ -1.71
MDM2-208ENST00000393410 ZNF572Q7Z3I7 529 aaPredicted RBP4.4□□□□□ -1.71
MDM2-208ENST00000393410 PRPF38AQ8NAV1 312 aaKnown RBP4.4□□□□□ -1.71
MDM2-208ENST00000393410 RNF169Q8NCN4 708 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 OR7D4Q8NG98 312 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 ZNF483Q8TF39 744 aaPredicted RBP4.4□□□□□ -1.71
MDM2-208ENST00000393410 CLIP3Q96DZ5 547 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 SORCS2Q96PQ0 1159 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 NDC1Q9BTX1 674 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 MENTQ9BUN1 341 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 BCO1Q9HAY6 547 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 SPON1Q9HCB6 807 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 SRRDQ9UH36 339 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 HDAC5Q9UQL6 1122 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 SIK3Q9Y2K2 1263 aa4.4□□□□□ -1.71
MDM2-208ENST00000393410 CXorf49A8MYA2 514 aaPredicted RBP4.39□□□□□ -1.71
MDM2-208ENST00000393410 PRR5-ARHGAP8B1AHC4 643 aa4.39□□□□□ -1.71
MDM2-208ENST00000393410 B5MCH6 92 aa4.39□□□□□ -1.71
MDM2-208ENST00000393410 FZD9O00144 591 aa4.39□□□□□ -1.71
MDM2-208ENST00000393410 PCDHGA12O60330 932 aa4.39□□□□□ -1.71
MDM2-208ENST00000393410 KATNA1O75449 491 aa4.39□□□□□ -1.71
MDM2-208ENST00000393410 SCAF4O95104 1147 aaKnown RBP4.39□□□□□ -1.71
MDM2-208ENST00000393410 PEX11BO96011 259 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms