RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 IER5LQ5T953 404 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 KIAA0319Q5VV43 1072 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 SLC27A1Q6PCB7 646 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 CABP7Q86V35 215 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 HACE1Q8IYU2 909 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 MCPH1Q8NEM0 835 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 FAM193BQ96PV7 902 aaPredicted RBP13.7□□□□□ -0.22
CTSC-202ENST00000393301 APOL5Q9BWW9 433 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 IRF2BPLQ9H1B7 796 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 TMEM60Q9H2L4 133 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 FZD8Q9H461 694 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 MRPL17Q9NRX2 175 aaKnown RBP13.7□□□□□ -0.22
CTSC-202ENST00000393301 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 INO80B-WBP1J3KQ70 363 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 URODP06132 367 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 ADH1AP07327 375 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 U2AF2P26368 475 aaKnown RBP eCLIP13.69□□□□□ -0.22
CTSC-202ENST00000393301 MLH1P40692 756 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 VCPP55072 806 aaKnown RBP13.69□□□□□ -0.22
CTSC-202ENST00000393301 GRIK3Q13003 919 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 GAD1Q99259 594 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
CTSC-202ENST00000393301 PRMT7Q9NVM4 692 aaPredicted RBP13.69□□□□□ -0.22
CTSC-202ENST00000393301 MIOSQ9NXC5 875 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 FNIP2Q9P278 1114 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 GVINP1Q7Z2Y8 2422 aa13.69□□□□□ -0.22
CTSC-202ENST00000393301 VWA8A3KMH1 1905 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 PTPRZ1P23471 2315 aaPredicted RBP13.68□□□□□ -0.22
CTSC-202ENST00000393301 POTEMA6NI47 508 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 DTNBO60941 627 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 POMCP01189 267 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 RPA1P27694 616 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 TXKP42681 527 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 TRAPPC10P48553 1259 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 GLUD2P49448 558 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 SCNN1GP51170 649 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 TRIM29Q14134 588 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 OTOP3Q7RTS5 596 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 CATSPER3Q86XQ3 398 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 C12orf76Q8N812 135 aaPredicted RBP13.68□□□□□ -0.22
CTSC-202ENST00000393301 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 CPB2Q96IY4 423 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 ZFP42Q96MM3 310 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 POLR3FQ9H1D9 316 aaPredicted RBP13.68□□□□□ -0.22
CTSC-202ENST00000393301 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
CTSC-202ENST00000393301 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTSC-202ENST00000393301 TRIP11Q15643 1979 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 WDR87Q6ZQQ6 2873 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 SPTBN4Q9H254 2564 aa13.68□□□□□ -0.22
CTSC-202ENST00000393301 TEX28O15482 410 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 B4GALT5O43286 388 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 MED24O75448 989 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 KLRC2P26717 231 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 LILRA6Q6PI73 481 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 ELMSAN1Q6PJG2 1045 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 TMC5Q6UXY8 1006 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 ACSF2Q96CM8 615 aaPredicted RBP13.67□□□□□ -0.22
CTSC-202ENST00000393301 C8orf76Q96K31 380 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 NACC1Q96RE7 527 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 CCDC113Q9H0I3 377 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 C2orf40Q9H1Z8 148 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 PLEKHA4Q9H4M7 779 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 WDR6Q9NNW5 1121 aaKnown RBP13.67□□□□□ -0.22
CTSC-202ENST00000393301 HES2Q9Y543 173 aa13.67□□□□□ -0.22
CTSC-202ENST00000393301 ZNF292O60281 2723 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 PROB1E7EW31 1015 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
CTSC-202ENST00000393301 USO1O60763 962 aaKnown RBP13.66□□□□□ -0.22
CTSC-202ENST00000393301 NR1I2O75469 434 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 GLUD1P00367 558 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 OR52Z1P0C646 297 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 CYP11B2P19099 503 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 CA8P35219 290 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 NAMPTP43490 491 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 OR1G1P47890 313 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTSC-202ENST00000393301 CREMQ03060 361 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTSC-202ENST00000393301 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 FUT10Q6P4F1 479 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 TAS1R1Q7RTX1 841 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 ZBTB33Q86T24 672 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 FEZF2Q8TBJ5 459 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 CCDC43Q96MW1 224 aaKnown RBP13.66□□□□□ -0.22
CTSC-202ENST00000393301 COLEC11Q9BWP8 271 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 TRIM6Q9C030 488 aaPredicted RBP13.66□□□□□ -0.22
CTSC-202ENST00000393301 MAN1C1Q9NR34 630 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 ZDHHC7Q9NXF8 308 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 IGSF9Q9P2J2 1179 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 EPS15L1Q9UBC2 864 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 ADAM28Q9UKQ2 775 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 DUSP12Q9UNI6 340 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms