RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 HOOK3Q86VS8 718 aa12.28□□□□□ -0.44
PDCD4-202ENST00000393104 SLCO2A1Q92959 643 aa12.28□□□□□ -0.44
PDCD4-202ENST00000393104 BTBD6Q96KE9 485 aa12.28□□□□□ -0.44
PDCD4-202ENST00000393104 ZC3H12CQ9C0D7 883 aaKnown RBP12.28□□□□□ -0.44
PDCD4-202ENST00000393104 CYLDQ9NQC7 956 aa12.28□□□□□ -0.44
PDCD4-202ENST00000393104 TYW1Q9NV66 732 aaKnown RBP12.28□□□□□ -0.44
PDCD4-202ENST00000393104 NOCTQ9UK39 431 aaKnown RBP12.28□□□□□ -0.44
PDCD4-202ENST00000393104 CHKBQ9Y259 395 aa12.28□□□□□ -0.44
PDCD4-202ENST00000393104 COL4A5P29400 1685 aa12.28□□□□□ -0.44
PDCD4-202ENST00000393104 CCDC169A6NNP5 214 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 RGS16O15492 202 aaPredicted RBP12.27□□□□□ -0.44
PDCD4-202ENST00000393104 MTA2O94776 668 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 ADSSP30520 456 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 FMO5P49326 533 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 EIF6P56537 245 aaKnown RBP12.27□□□□□ -0.44
PDCD4-202ENST00000393104 C11orf63Q6NUN7 778 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 DENND1AQ8TEH3 1009 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 PARD3BQ8TEW8 1205 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 GPCPD1Q9NPB8 672 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 KANSL3Q9P2N6 904 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 SEC63Q9UGP8 760 aaKnown RBP12.27□□□□□ -0.44
PDCD4-202ENST00000393104 DNAJC12Q9UKB3 198 aa12.27□□□□□ -0.44
PDCD4-202ENST00000393104 DPPA5A6NC42 116 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 RPA1P27694 616 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 ZNF131P52739 623 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 ADCY2Q08462 1091 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 PPP1R18Q6NYC8 613 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 ARHGEF19Q8IW93 802 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 NT5C3AQ9H0P0 336 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 BATF3Q9NR55 127 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 DIS3Q9Y2L1 958 aaKnown RBP12.27□□□□□ -0.45
PDCD4-202ENST00000393104 ASB3Q9Y575 518 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 LIN7AO14910 233 aaPredicted RBP12.27□□□□□ -0.45
PDCD4-202ENST00000393104 UNC5CO95185 931 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 COILP38432 576 aaPredicted RBP12.27□□□□□ -0.45
PDCD4-202ENST00000393104 CCDC137Q6PK04 289 aaKnown RBP12.27□□□□□ -0.45
PDCD4-202ENST00000393104 TTLL6Q8N841 843 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 KAT5Q92993 513 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 SYT15Q9BQS2 421 aa12.27□□□□□ -0.45
PDCD4-202ENST00000393104 SPDYE5A6NIY4 337 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 ATMINO43313 823 aaPredicted RBP12.26□□□□□ -0.45
PDCD4-202ENST00000393104 TCEA3O75764 348 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 FERP16591 822 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 COMTP21964 271 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 NMT1P30419 496 aaKnown RBP12.26□□□□□ -0.45
PDCD4-202ENST00000393104 SHMT1P34896 483 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 IFI16Q16666 785 aaKnown RBP12.26□□□□□ -0.45
PDCD4-202ENST00000393104 RNF43Q68DV7 783 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 KDM3AQ9Y4C1 1321 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 EIF4E1BA6NMX2 242 aaKnown RBP12.26□□□□□ -0.45
PDCD4-202ENST00000393104 SMAPO00193 183 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 TPBGLP0DKB5 382 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 ICA1Q05084 483 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 ACVR2BQ13705 512 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 PLEKHG4Q58EX7 1191 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 DACT2Q5SW24 774 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 C1orf186Q6ZWK4 172 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 MICAL1Q8TDZ2 1067 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 MAML1Q92585 1016 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 MXD3Q9BW11 206 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 OLFML3Q9NRN5 406 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 NOP53Q9NZM5 478 aaKnown RBP12.26□□□□□ -0.45
PDCD4-202ENST00000393104 A0A1B0GUA9 196 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 ANKRD62A6NC57 917 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 RASGRF2O14827 1237 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 WFS1O76024 890 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
PDCD4-202ENST00000393104 TRIM49P0CI25 452 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 TRIM49CP0CI26 452 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 CHRNA3P32297 505 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 PDE6CP51160 858 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 ASPRV1Q53RT3 343 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 LRCH2Q5VUJ6 765 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 EGFL6Q8IUX8 553 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 CCHCR1Q8TD31 782 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 NRG4Q8WWG1 115 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 LRRC19Q9H756 370 aa12.26□□□□□ -0.45
PDCD4-202ENST00000393104 IGLV3-22A0A075B6J6 115 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 MAGEB2O15479 319 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 GBP2P32456 591 aaPredicted RBP12.25□□□□□ -0.45
PDCD4-202ENST00000393104 CCDC15Q0P6D6 951 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 MFSD14BQ5SR56 506 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 THEMIS2Q5TEJ8 643 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 RINT1Q6NUQ1 792 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 ENDOVQ8N8Q3 282 aaKnown RBP12.25□□□□□ -0.45
PDCD4-202ENST00000393104 ZDHHC15Q96MV8 337 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 TMEM237Q96Q45 408 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 MIPEPQ99797 713 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 HSD17B14Q9BPX1 270 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 MYLK2Q9H1R3 596 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 LGALS13Q9UHV8 139 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 TISP43B9A030 160 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 O00370 1275 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 ZBTB5O15062 677 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 MTFR1Q15390 333 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 Q4G0T1 1027 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 KCTD1Q719H9 257 aa12.25□□□□□ -0.45
PDCD4-202ENST00000393104 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms