RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 KMT2EQ8IZD2 1858 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 A0A1B0GUA9 196 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 CARNS1A5YM72 827 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 SOD2P04179 222 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 ASGR2P07307 311 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 RPA1P27694 616 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 MTHFRP42898 656 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 RBM25P49756 843 aaKnown RBP18.36■□□□□ 0.53
PTPRK-208ENST00000392449 TOB1P50616 345 aaPredicted RBP18.36■□□□□ 0.53
PTPRK-208ENST00000392449 HMGN5P82970 282 aaKnown RBP18.36■□□□□ 0.53
PTPRK-208ENST00000392449 SIGLEC14Q08ET2 396 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 CDCA2Q69YH5 1023 aaPredicted RBP18.36■□□□□ 0.53
PTPRK-208ENST00000392449 KIAA1841Q6NSI8 718 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 MCPH1Q8NEM0 835 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 ZSCAN31Q96LW9 406 aaPredicted RBP18.36■□□□□ 0.53
PTPRK-208ENST00000392449 RIPOR3Q96MK2 946 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 NECTIN4Q96NY8 510 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 HERC2P3Q9BVR0 1158 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 EMILIN2Q9BXX0 1053 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 GIT1Q9Y2X7 761 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 NR2E1Q9Y466 385 aa18.36■□□□□ 0.53
PTPRK-208ENST00000392449 ZDBF2Q9HCK1 2354 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 ARHGEF35A5YM69 484 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 SPDYE4A6NLX3 237 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 EFEMP2O95967 443 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 PDGFBP01127 241 aaPredicted RBP18.35■□□□□ 0.53
PTPRK-208ENST00000392449 URODP06132 367 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 RNF168Q8IYW5 571 aaPredicted RBP18.35■□□□□ 0.53
PTPRK-208ENST00000392449 KREMEN2Q8NCW0 462 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 PAAF1Q9BRP4 392 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 PDZD7Q9H5P4 517 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 SH2B1Q9NRF2 756 aaPredicted RBP18.35■□□□□ 0.53
PTPRK-208ENST00000392449 PCDHB6Q9Y5E3 794 aa18.35■□□□□ 0.53
PTPRK-208ENST00000392449 PP2D1A8MPX8 630 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 TEX28O15482 410 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 CYP11B2P19099 503 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 CCT6AP40227 531 aaKnown RBP18.34■□□□□ 0.53
PTPRK-208ENST00000392449 NHLH1Q02575 133 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 ATAT1Q5SQI0 421 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 BMP8AQ7Z5Y6 402 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 RPS6KC1Q96S38 1066 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 GPR62Q9BZJ7 368 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 FZD8Q9H461 694 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 SFXN1Q9H9B4 322 aa18.34■□□□□ 0.53
PTPRK-208ENST00000392449 PRMT7Q9NVM4 692 aaPredicted RBP18.34■□□□□ 0.53
PTPRK-208ENST00000392449 BRD1O95696 1058 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 SPATA31D3P0C874 917 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 GLUD2P49448 558 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 VCPP55072 806 aaKnown RBP18.33■□□□□ 0.53
PTPRK-208ENST00000392449 KIAA0319Q5VV43 1072 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 EEF1DP3Q658K8 133 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 SPATA31D4Q6ZUB0 917 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 ALYREFQ86V81 257 aaKnown RBP18.33■□□□□ 0.53
PTPRK-208ENST00000392449 PPFIBP1Q86W92 1011 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 GLYCTKQ8IVS8 523 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 ZBTB8OSQ8IWT0 167 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 HACE1Q8IYU2 909 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 PRSS33Q8NF86 280 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 HASPINQ8TF76 798 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 CCDC113Q9H0I3 377 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 BHMT2Q9H2M3 363 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 MAN1C1Q9NR34 630 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 LRWD1Q9UFC0 647 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 LIMD1Q9UGP4 676 aa18.33■□□□□ 0.53
PTPRK-208ENST00000392449 PRKCBP05771 671 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 U2AF2P26368 475 aaKnown RBP eCLIP18.33■□□□□ 0.527e-7■■□□□ 12.1
PTPRK-208ENST00000392449 FXR2P51116 673 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTPRK-208ENST00000392449 GRIK3Q13003 919 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 PTGDRQ13258 359 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 ORC2Q13416 577 aaPredicted RBP18.33■□□□□ 0.52
PTPRK-208ENST00000392449 PRPF4BQ13523 1007 aaKnown RBP18.33■□□□□ 0.52
PTPRK-208ENST00000392449 IL17AQ16552 155 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 TMEM132AQ24JP5 1023 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 FUT10Q6P4F1 479 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 GPR149Q86SP6 731 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 FBXL6Q8N531 539 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 TDRD5Q8NAT2 981 aaKnown RBP18.33■□□□□ 0.52
PTPRK-208ENST00000392449 DDX19AQ9NUU7 478 aaKnown RBP18.33■□□□□ 0.52
PTPRK-208ENST00000392449 SNTG2Q9NY99 539 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 NOL7Q9UMY1 257 aaKnown RBP18.33■□□□□ 0.52
PTPRK-208ENST00000392449 KIAA1024Q9UPX6 916 aa18.33■□□□□ 0.52
PTPRK-208ENST00000392449 CASTOR2A6NHX0 329 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 PTGESO14684 152 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 CD2BP2O95400 341 aaKnown RBP18.32■□□□□ 0.52
PTPRK-208ENST00000392449 CENPBP07199 599 aaPredicted RBP18.32■□□□□ 0.52
PTPRK-208ENST00000392449 RPL17P18621 184 aaKnown RBP18.32■□□□□ 0.52
PTPRK-208ENST00000392449 CDC25AP30304 524 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 TRAPPC10P48553 1259 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 FAM187BQ17R55 369 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 HAUS3Q68CZ6 603 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 SUGP1Q8IWZ8 645 aaKnown RBP18.32■□□□□ 0.52
PTPRK-208ENST00000392449 DEPTORQ8TB45 409 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 PRIMPOLQ96LW4 560 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 COLEC11Q9BWP8 271 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 STK39Q9UEW8 545 aa18.32■□□□□ 0.52
PTPRK-208ENST00000392449 RFPL2O75678 378 aa18.31■□□□□ 0.52
PTPRK-208ENST00000392449 RECQL4O94761 1208 aa18.31■□□□□ 0.52
PTPRK-208ENST00000392449 NAMPTP43490 491 aa18.31■□□□□ 0.52
PTPRK-208ENST00000392449 DSG1Q02413 1049 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms