RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 SPATA31A7Q8IWB4 1347 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 PASKQ96RG2 1323 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 MYH11P35749 1972 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 COL16A1Q07092 1604 aaPredicted RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 MIF4GDA9UHW6 222 aaKnown RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 TP73O15350 636 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 ECEL1O95672 775 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 CFBP00751 764 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 OAS1P00973 400 aaKnown RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 CETPP11597 493 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 CHRNB2P17787 502 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 MGAT5Q09328 741 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 RRP1BQ14684 758 aaKnown RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 SIX1Q15475 284 aaPredicted RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 TNFAIP8L3Q5GJ75 292 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 SPATA21Q7Z572 469 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 NOP9Q86U38 636 aaKnown RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 SRRM1Q8IYB3 904 aaKnown RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 TBC1D22AQ8WUA7 517 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 FAM20AQ96MK3 541 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 TGS1Q96RS0 853 aaKnown RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 HSD17B14Q9BPX1 270 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 STMN4Q9H169 189 aaPredicted RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 MTUS1Q9ULD2 1270 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 CCDC189A1A4V9 331 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 HLA-DOAP06340 250 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 BCRP11274 1271 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 GAP43P17677 238 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 SREBF1P36956 1147 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 PEX19P40855 299 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 BNIP1Q12981 228 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 C2CD6Q53TS8 623 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 LRCH2Q5VUJ6 765 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 NAIF1Q69YI7 327 aaPredicted RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 CRELD2Q6UXH1 353 aaPredicted RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 BZW1Q7L1Q6 419 aaKnown RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 MIGA2Q7L4E1 593 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 ZNF564Q8TBZ8 553 aaPredicted RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 SPDL1Q96EA4 605 aa14.99□□□□□ -0.01
CCDC57-203ENST00000392343 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.99□□□□□ -0.017e-6■□□□□ 10.3
CCDC57-203ENST00000392343 NOP53Q9NZM5 478 aaKnown RBP14.99□□□□□ -0.01
CCDC57-203ENST00000392343 ATP8B3O60423 1300 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 GOLGA8IPA6NC78 632 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 GOLGA8JA6NMD2 632 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 F5H6K3 240 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 TBX3O15119 743 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 ALAS1P13196 640 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 STX2P32856 288 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 MSH2P43246 934 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 RIPK1Q13546 671 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 GALNTL6Q49A17 601 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 CGB2Q6NT52 195 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 BTNL9Q6UXG8 535 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 OTOP1Q7RTM1 612 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 SIAH1Q8IUQ4 282 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 HOMEZQ8IX15 550 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 PPM1KQ8N3J5 372 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 POLR3CQ9BUI4 534 aaPredicted RBP14.98□□□□□ -0.01
CCDC57-203ENST00000392343 EP400Q96L91 3159 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 EIF3DO15371 548 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC57-203ENST00000392343 CERKLQ49MI3 558 aaPredicted RBP14.98□□□□□ -0.01
CCDC57-203ENST00000392343 EPC2Q52LR7 807 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 SGO2Q562F6 1265 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 C11orf63Q6NUN7 778 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 C15orf52Q6ZUT6 534 aaKnown RBP14.98□□□□□ -0.01
CCDC57-203ENST00000392343 MICAL1Q8TDZ2 1067 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 CBWD1Q9BRT8 395 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 TRIM7Q9C029 511 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 GLT8D2Q9H1C3 349 aa14.98□□□□□ -0.01
CCDC57-203ENST00000392343 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC57-203ENST00000392343 DDTLA6NHG4 134 aaPredicted RBP14.97□□□□□ -0.01
CCDC57-203ENST00000392343 HP1BP3Q5SSJ5 553 aaPredicted RBP14.97□□□□□ -0.01
CCDC57-203ENST00000392343 RBM26Q5T8P6 1007 aaKnown RBP14.97□□□□□ -0.01
CCDC57-203ENST00000392343 MOXD1Q6UVY6 613 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 ZNF653Q96CK0 615 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 C9orf72Q96LT7 481 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 HERPUD2Q9BSE4 406 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 TMEM109Q9BVC6 243 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 HEMGNQ9BXL5 484 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 DMAC2Q9NW81 257 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 CCNHP51946 323 aaPredicted RBP14.97□□□□□ -0.01
CCDC57-203ENST00000392343 ITGA8P53708 1063 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 LLGL2Q6P1M3 1020 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 FAM196AQ6ZSG2 479 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 MRRFQ96E11 262 aaKnown RBP14.97□□□□□ -0.01
CCDC57-203ENST00000392343 FAM84AQ96KN4 292 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 TMEM237Q96Q45 408 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 MKNK1Q9BUB5 465 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 ETNK1Q9HBU6 452 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 ADAM22Q9P0K1 906 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 ARL2BPQ9Y2Y0 163 aa14.97□□□□□ -0.01
CCDC57-203ENST00000392343 K7ENM7 598 aa14.96□□□□□ -0.01
CCDC57-203ENST00000392343 THAP12O43422 761 aa14.96□□□□□ -0.01
CCDC57-203ENST00000392343 HSPA6P17066 643 aa14.96□□□□□ -0.01
CCDC57-203ENST00000392343 MFSD5Q6N075 450 aa14.96□□□□□ -0.01
CCDC57-203ENST00000392343 SPOCK2Q92563 424 aa14.96□□□□□ -0.01
CCDC57-203ENST00000392343 CD101Q93033 1021 aa14.96□□□□□ -0.01
CCDC57-203ENST00000392343 RUNDC3BQ96NL0 473 aa14.96□□□□□ -0.01
CCDC57-203ENST00000392343 WNT8AQ9H1J5 351 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms