RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 PTPROQ16827 1216 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 PUS10Q3MIT2 529 aaKnown RBP12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 SPOUT1Q5T280 376 aaKnown RBP12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 EEF1DP3Q658K8 133 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 SLC27A1Q6PCB7 646 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 KCNT2Q6UVM3 1135 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 GLB1LQ6UWU2 654 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 TMEM173Q86WV6 379 aaPredicted RBP12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 DEPTORQ8TB45 409 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 POF1BQ8WVV4 589 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 PGBD4Q96DM1 585 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 IFT74Q96LB3 600 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 DRC1Q96MC2 740 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 REEP2Q9BRK0 252 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 OCEL1Q9H607 264 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 KCND2Q9NZV8 630 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 TFIP11Q9UBB9 837 aaKnown RBP12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 DNAJB4Q9UDY4 337 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 INPP5FQ9Y2H2 1132 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZDHHC9Q9Y397 364 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 PCDHGC5Q9Y5F6 944 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 MTCL1Q9Y4B5 1905 aaKnown RBP12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZNF318Q5VUA4 2279 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 SFI1A8K8P3 1242 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 ACKR2O00590 384 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 DCXO43602 365 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 C7P10643 843 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 LIG1P18858 919 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 NHLH1Q02575 133 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 MAPK6Q16659 721 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 CTC1Q2NKJ3 1217 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 NOMO2Q5JPE7 1267 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 NT5DC1Q5TFE4 455 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 ADGRD2Q7Z7M1 963 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 GPBP1Q86WP2 473 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZNF280BQ86YH2 543 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 SLC39A11Q8N1S5 342 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 KRI1Q8N9T8 703 aaKnown RBP12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 BCL7CQ8WUZ0 217 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 RSPH1Q8WYR4 309 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 LARP4BQ92615 738 aaKnown RBP12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZFP42Q96MM3 310 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZNF558Q96NG5 402 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 TIPINQ9BVW5 301 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 NSUN3Q9H649 340 aaKnown RBP12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 NRDE2Q9H7Z3 1164 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 AAASQ9NRG9 546 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 PCDHB12Q9Y5F1 795 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 C2orf16Q68DN1 1984 aa12.72□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZMYM2Q9UBW7 1377 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 ARL5CA6NH57 179 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 NT5C1B-RDH14C9J2C7 533 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 FSCN2O14926 492 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 N4BP3O15049 544 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 SPTLC2O15270 562 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 DDHD2O94830 711 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 YEATS4O95619 227 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 ITGA4P13612 1032 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 PLS3P13797 630 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 AKAP5P24588 427 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 GTF2F1P35269 517 aaKnown RBP eCLIP12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 MLH1P40692 756 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 MRE11P49959 708 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZNF131P52739 623 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 EFNA5P52803 228 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 BCAR1P56945 870 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 PLCB3Q01970 1234 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 DLX2Q07687 328 aaPredicted RBP12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 DMP1Q13316 513 aaPredicted RBP12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 DHX8Q14562 1220 aaKnown RBP12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 STK38Q15208 465 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 CSPP1Q1MSJ5 1256 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 ADHFE1Q8IWW8 467 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 THNSL1Q8IYQ7 743 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 CNNM3Q8NE01 707 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 GSTCDQ8NEC7 633 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 SPIRE2Q8WWL2 714 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 FBXL18Q96ME1 805 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 APOL6Q9BWW8 343 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 CXCL16Q9H2A7 254 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 C17orf75Q9HAS0 396 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 MIOSQ9NXC5 875 aa12.71□□□□□ -0.37
APOBEC3F-202ENST00000381565 DENND4AQ7Z401 1863 aa12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 ABLIM1O14639 778 aa12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 SLC16A4O15374 487 aa12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 PPP6R2O75170 966 aa12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 BRD1O95696 1058 aa12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 POMCP01189 267 aa12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 MAPTP10636 758 aaKnown RBP12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 PDIA4P13667 645 aaKnown RBP12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 PPM1AP35813 382 aa12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 SLC11A1P49279 550 aa12.7□□□□□ -0.38
APOBEC3F-202ENST00000381565 SCNN1GP51170 649 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms