RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 FGFBP2Q9BYJ0 223 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 BMP2KQ9NSY1 1161 aaPredicted RBP20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 MTUS1Q9ULD2 1270 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 USP17L12C9JPN9 530 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 USP17L21D6R901 530 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 HAUS5O94927 633 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 NR2F2P24468 414 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 BCAMP50895 628 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 GALK1P51570 392 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 ADARP55265 1226 aaKnown RBP20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 OVGP1Q12889 678 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 HERC4Q5GLZ8 1057 aaPredicted RBP20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 DAB2IPQ5VWQ8 1189 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 CLNKQ7Z7G1 428 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 SATL1Q86VE3 508 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.26■□□□□ 0.837e-24■■■■■ 30.5
SMARCD1-201ENST00000381513 ZNF653Q96CK0 615 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 TXNDC9O14530 226 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 KRT15P19012 456 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 MOGSQ13724 837 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 MFSD4BQ5TF39 518 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 CYP4F22Q6NT55 531 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 CEP63Q96MT8 703 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 UIMC1Q96RL1 719 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 CHORDC1Q9UHD1 332 aaPredicted RBP20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 SYNGAP1Q96PV0 1343 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 A0A0J9YVX5 310 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 MARCH6O60337 910 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 CDH16O75309 829 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 TTC4O95801 387 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 CETPP11597 493 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 STAT1P42224 750 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 CPA2P48052 419 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 NAPAP54920 295 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 NPEPPSP55786 919 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 EVX2Q03828 476 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 NONOQ15233 471 aaKnown RBP eCLIP20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 C4orf33Q8N1A6 199 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 LZICQ8WZA0 190 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 ARHGEF26Q96DR7 871 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 C9orf72Q96LT7 481 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 ALG6Q9Y672 507 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 PARP4Q9UKK3 1724 aaKnown RBP20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 VCAM1P19320 739 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 CA4P22748 312 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 DYNLL1P63167 89 aaKnown RBP20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 CATSPER2Q96P56 530 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 SPZ1Q9BXG8 430 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 ARL8BQ9NVJ2 186 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 NFAT5O94916 1531 aa20.25■□□□□ 0.83
SMARCD1-201ENST00000381513 TCRBV7S2A1N4TA0A589 114 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 TRAFD1O14545 582 aaPredicted RBP20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 TPD52L2O43399 206 aaKnown RBP20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 KRT18P05783 430 aaKnown RBP20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 TTLL12Q14166 644 aaPredicted RBP20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 SLC44A4Q53GD3 710 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 KRT79Q5XKE5 535 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 ADGRA1Q86SQ6 560 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 C10orf82Q8WW14 230 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 STK17AQ9UEE5 414 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 RNASEH1O60930 286 aaKnown RBP20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 ZWINTO95229 277 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 VIL1P09327 827 aaKnown RBP20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 ESRRAP11474 423 aaPredicted RBP20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 AMPD1P23109 780 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 PON1P27169 355 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 PGM1P36871 562 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 HPCAP84074 193 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 ISLR2Q6UXK2 745 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 NDE1Q9NXR1 346 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 HSFX1Q9UBD0 423 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 UMODL1Q5DID0 1318 aa20.24■□□□□ 0.83
SMARCD1-201ENST00000381513 MAGEB3O15480 346 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 PGM3O95394 542 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 CSF1RP07333 972 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 SEPT7Q16181 437 aaKnown RBP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 KLC3Q6P597 504 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 CCDC62Q6P9F0 684 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 ARMCX6Q7L4S7 300 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 KCNK18Q7Z418 384 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 PNMA5Q96PV4 448 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 ECSITQ9BQ95 431 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 THAP2Q9H0W7 228 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 ARHGEF38Q9NXL2 777 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 PCYOX1Q9UHG3 505 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 POC1B-GALNT4F8VUJ3 575 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 BCL9O00512 1426 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 EDF1O60869 148 aaKnown RBP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 MESDQ14696 234 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 NEK8Q86SG6 692 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 ZBTB8BQ8NAP8 495 aaPredicted RBP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 NUDT12Q9BQG2 462 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 CPVLQ9H3G5 476 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 C5P01031 1676 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 RGPD8O14715 1765 aaPredicted RBP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 RAD21O60216 631 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 USP1O94782 785 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms