RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 DUOXA2Q1HG44 320 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 PRAMEF18Q5VWM3 479 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 ARMCX2Q7L311 632 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 SNF8Q96H20 258 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 LRRC37BQ96QE4 947 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 JPH1Q9HDC5 661 aaPredicted RBP18.24■□□□□ 0.51
SGCB-201ENST00000381431 NAGPAQ9UK23 515 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 GYG2O15488 501 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 KITP10721 976 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 COMTP21964 271 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 SDC4P31431 198 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 CASP4P49662 377 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 ARPP19P56211 112 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 BCAR1P56945 870 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 BYSLQ13895 437 aaKnown RBP18.23■□□□□ 0.51
SGCB-201ENST00000381431 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 HAUS2Q9NVX0 235 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 L1RE1Q9UN81 338 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 PIK3R2O00459 728 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 EIF3HO15372 352 aaKnown RBP eCLIP18.23■□□□□ 0.51
SGCB-201ENST00000381431 FAM167AQ96KS9 214 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 AGBL1Q96MI9 1066 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 PI4K2AQ9BTU6 479 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 SLC13A1Q9BZW2 595 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 ASNSD1Q9NWL6 643 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 IP6K2Q9UHH9 426 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 STRIP2Q9ULQ0 834 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 EIF4E1BA6NMX2 242 aaKnown RBP18.23■□□□□ 0.51
SGCB-201ENST00000381431 MED24O75448 989 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 ENOSF1Q7L5Y1 443 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 KCNV2Q8TDN2 545 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 DNAJC7Q99615 494 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 TMEM117Q9H0C3 514 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
SGCB-201ENST00000381431 A0A087X0B3 334 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 NR3C2P08235 984 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 ERFP50548 548 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 EZH2Q15910 746 aaKnown RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 LONRF1Q17RB8 773 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 FBXW10Q5XX13 1052 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 ANKMY2Q8IV38 441 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 SLC10A4Q96EP9 437 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 PACSIN1Q9BY11 444 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 KLHL8Q9P2G9 620 aaPredicted RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 MEFVO15553 781 aaPredicted RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 SMIM24O75264 130 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 CDH6P55285 790 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 TMCO4Q5TGY1 634 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 SLC30A10Q6XR72 485 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 TRAPPC11Q7Z392 1133 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 CRLF3Q8IUI8 442 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 ATL2Q8NHH9 583 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 MRPL4Q9BYD3 311 aaKnown RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 TCP11X1B4DZS4 312 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 DCTN3O75935 186 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 KRT38O76015 456 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 KRT7P08729 469 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 LSP1P33241 339 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 RWDD4Q6NW29 188 aaKnown RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 JAMLQ86YT9 394 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 RYBPQ8N488 228 aaPredicted RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 SKA2Q8WVK7 121 aaPredicted RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 HNRNPLLQ8WVV9 542 aaKnown RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 OTUD5Q96G74 571 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 KIFC3Q9BVG8 833 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 VPS11Q9H270 941 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 NOP53Q9NZM5 478 aaKnown RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 THOC5Q13769 683 aaKnown RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 DSTYKQ6XUX3 929 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 WDR75Q8IWA0 830 aaKnown RBP18.22■□□□□ 0.51
SGCB-201ENST00000381431 MMGT1Q8N4V1 131 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 TMEM39BQ9GZU3 492 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 ARHGAP20Q9P2F6 1191 aa18.22■□□□□ 0.51
SGCB-201ENST00000381431 MSH4O15457 936 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 SRGAP2BP0DMP2 458 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 SMARCA1P28370 1054 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 ATG16L1Q676U5 607 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 DAGLBQ8NCG7 672 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 MORC4Q8TE76 937 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 LBHD1Q9BQE6 289 aaPredicted RBP18.21■□□□□ 0.51
SGCB-201ENST00000381431 DGAT1O75907 488 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 PHKA2P46019 1235 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 KYNUQ16719 465 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 ACER1Q8TDN7 264 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 ZNF473Q8WTR7 871 aaKnown RBP18.21■□□□□ 0.51
SGCB-201ENST00000381431 RUSC1Q9BVN2 902 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 DIP2BQ9P265 1576 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 LRRIQ3A6PVS8 624 aaPredicted RBP18.21■□□□□ 0.51
SGCB-201ENST00000381431 STAT5BP51692 787 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 KIF22Q14807 665 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 CENPPQ6IPU0 288 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 C1orf228Q6PIY5 440 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 ABI1Q8IZP0 508 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 TTC25Q96NG3 672 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 PPP1R9AQ9ULJ8 1098 aa18.21■□□□□ 0.51
SGCB-201ENST00000381431 CIITAP33076 1130 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 COG7P83436 770 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms