RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 MSTO1Q9BUK6 570 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 TUBB2BQ9BVA1 445 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 TUT1Q9H6E5 874 aaKnown RBP23.28■■□□□ 1.32
GMDS-202ENST00000380815 MRFAP1Q9Y605 127 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 DUSP10Q9Y6W6 482 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 EVI5O60447 810 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 GFPT2O94808 682 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 DLATP10515 647 aaKnown RBP23.27■■□□□ 1.32
GMDS-202ENST00000380815 GPC3P51654 580 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 NLRP11P59045 1033 aaKnown RBP23.27■■□□□ 1.32
GMDS-202ENST00000380815 DGKDQ16760 1214 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 CRELD2Q6UXH1 353 aaPredicted RBP23.27■■□□□ 1.32
GMDS-202ENST00000380815 VPS36Q86VN1 386 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 FBXL13Q8NEE6 735 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 SECISBP2LQ93073 1101 aaKnown RBP23.27■■□□□ 1.32
GMDS-202ENST00000380815 UBE2TQ9NPD8 197 aaPredicted RBP23.27■■□□□ 1.32
GMDS-202ENST00000380815 ANKFY1Q9P2R3 1169 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 TOM1L1O75674 476 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 CLCN3P51790 818 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 POU5F1BQ06416 359 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 SV2AQ7L0J3 742 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 LINC01465Q8N7H1 131 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 NFKBIZQ9BYH8 718 aa23.27■■□□□ 1.32
GMDS-202ENST00000380815 CLDN3O15551 220 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 ADCY6O43306 1168 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 PRKCBP05771 671 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 KLRC1P26715 233 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 MATR3P43243 847 aaKnown RBP eCLIP23.26■■□□□ 1.319e-7■■■□□ 17.4
GMDS-202ENST00000380815 ACOT2P49753 483 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 IGBP1P78318 339 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 OLFML2BQ68BL8 750 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 ARHGEF19Q8IW93 802 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 SOCS4Q8WXH5 440 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 ACO2Q99798 780 aaKnown RBP23.26■■□□□ 1.31
GMDS-202ENST00000380815 TOPORSQ9NS56 1045 aaPredicted RBP23.26■■□□□ 1.31
GMDS-202ENST00000380815 FLRT1Q9NZU1 646 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 DOCK3Q8IZD9 2030 aa23.26■■□□□ 1.31
GMDS-202ENST00000380815 MACROD2A1Z1Q3 448 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 LRRN2O75325 713 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 PNMA6AP0CW24 399 aaPredicted RBP23.25■■□□□ 1.31
GMDS-202ENST00000380815 RGS2P41220 211 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 TM4SF4P48230 202 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 PTENP60484 403 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 BMS1Q14692 1282 aaKnown RBP23.25■■□□□ 1.31
GMDS-202ENST00000380815 C15orf39Q6ZRI6 1047 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 SEMA4DQ92854 862 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 NLRP4Q96MN2 994 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 FNBP1Q96RU3 617 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 FZD8Q9H461 694 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 RAB20Q9NX57 234 aa23.25■■□□□ 1.31
GMDS-202ENST00000380815 RBAKQ9NYW8 714 aaPredicted RBP23.25■■□□□ 1.31
GMDS-202ENST00000380815 ACKR2O00590 384 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 CRHR2Q13324 411 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 ARHGAP44Q17R89 818 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 TRIM58Q8NG06 486 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 TAS1R2Q8TE23 839 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 HHIPL1Q96JK4 782 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 GJD2Q9UKL4 321 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 ABT1Q9ULW3 272 aaKnown RBP23.24■■□□□ 1.31
GMDS-202ENST00000380815 GNEQ9Y223 722 aaKnown RBP23.24■■□□□ 1.31
GMDS-202ENST00000380815 A6NJR5 290 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 TTLL13PA6NNM8 815 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 FOXN3O00409 490 aaPredicted RBP23.24■■□□□ 1.31
GMDS-202ENST00000380815 ECM2O94769 699 aaPredicted RBP23.24■■□□□ 1.31
GMDS-202ENST00000380815 GJB1P08034 283 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 ZNF865P0CJ78 1059 aaPredicted RBP23.24■■□□□ 1.31
GMDS-202ENST00000380815 KIF22Q14807 665 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 NAB2Q15742 525 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 PRAMEF19Q5SWL8 479 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 RNF10Q8N5U6 811 aaKnown RBP23.24■■□□□ 1.31
GMDS-202ENST00000380815 TSC1Q92574 1164 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 ZBTB10Q96DT7 871 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 APBA2Q99767 749 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 CDC23Q9UJX2 597 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 NAGPAQ9UK23 515 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 NENFQ9UMX5 172 aa23.24■■□□□ 1.31
GMDS-202ENST00000380815 ATP8B3O60423 1300 aa23.23■■□□□ 1.31
GMDS-202ENST00000380815 ZC3H11AO75152 810 aaKnown RBP eCLIP23.23■■□□□ 1.314e-6■■■■□ 21.6
GMDS-202ENST00000380815 TMOD1P28289 359 aa23.23■■□□□ 1.31
GMDS-202ENST00000380815 MTHFD1LQ6UB35 978 aa23.23■■□□□ 1.31
GMDS-202ENST00000380815 TSHZ1Q6ZSZ6 1077 aa23.23■■□□□ 1.31
GMDS-202ENST00000380815 ZNF516Q92618 1163 aa23.23■■□□□ 1.31
GMDS-202ENST00000380815 SYT11Q9BT88 431 aa23.23■■□□□ 1.31
GMDS-202ENST00000380815 TULP1O00294 542 aaPredicted RBP23.22■■□□□ 1.31
GMDS-202ENST00000380815 ABLIM1O14639 778 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 FAM189A1O60320 539 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 TACC1O75410 805 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 IGHA2P01877 340 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 PROZP22891 400 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 MBTD1Q05BQ5 628 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 MCL1Q07820 350 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 PPFIA1Q13136 1202 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 ZACNQ401N2 412 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 ZBTB41Q5SVQ8 909 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 ALKBH5Q6P6C2 394 aaKnown RBP23.22■■□□□ 1.31
GMDS-202ENST00000380815 IFNLR1Q8IU57 520 aaPredicted RBP23.22■■□□□ 1.31
GMDS-202ENST00000380815 SMC1BQ8NDV3 1235 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 NT5C1BQ96P26 610 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 TCHPQ9BT92 498 aa23.22■■□□□ 1.31
GMDS-202ENST00000380815 PDE11AQ9HCR9 933 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms