RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 RSPH10BP0C881 870 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 CASP4P49662 377 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 ASPHQ12797 758 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 TFDP2Q14188 446 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 KLHL38Q2WGJ6 581 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 TRPM8Q7Z2W7 1104 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 TMEM139Q8IV31 216 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 C7orf31Q8N865 590 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 CCNYQ8ND76 341 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 KCNV2Q8TDN2 545 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 HSPH1Q92598 858 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 Q9H521 79 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 STOML1Q9UBI4 398 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 IP6K2Q9UHH9 426 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 VEGFAP15692 232 aaPredicted RBP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 SLC1A1P43005 524 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 MEI1Q5TIA1 1274 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 ATG16L1Q676U5 607 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 PCGF5Q86SE9 256 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 CCT8L1PA6NM43 557 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 CASQ2O14958 399 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 MAP3K7O43318 606 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 HAUS5O94927 633 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 YWHABP31946 246 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 MAPK7Q13164 816 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 KYNUQ16719 465 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 CDO1Q16878 200 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SWSAP1Q6NVH7 229 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 ZNF571Q7Z3V5 609 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 GPD1LQ8N335 351 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 FAF2Q96CS3 445 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SGSM3Q96HU1 749 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 THAP2Q9H0W7 228 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 MYO5BQ9ULV0 1848 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 RBBP5Q15291 538 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 HHIPL2Q6UWX4 724 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 BARGINQ6ZT62 677 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 ATP11CQ8NB49 1132 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SPATA20Q8TB22 786 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 ACTRT1Q8TDG2 376 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 RBM15Q96T37 977 aaKnown RBP eCLIP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 RIOX1Q9H6W3 641 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 RNF146Q9NTX7 359 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SENP1Q9P0U3 644 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 CHORDC1Q9UHD1 332 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 TMEM120BA0PK00 339 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 PDE2AO00408 941 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 ARL4AP40617 200 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 ARSEP51690 589 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 LMBRD2Q68DH5 695 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 GADL1Q6ZQY3 521 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SYDE1Q6ZW31 735 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 KCTD17Q8N5Z5 321 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 HEXIM2Q96MH2 286 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 NLRP4Q96MN2 994 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SLC40A1Q9NP59 571 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 PCDHA10Q9Y5I2 948 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 ATMINO43313 823 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 C21orf2O43822 256 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 AKAP3O75969 853 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SH3BGRP55822 239 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 SNRNP35Q16560 246 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 FOXR1Q6PIV2 292 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 NSUN6Q8TEA1 469 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 PCSK1NQ9UHG2 260 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 STRIP2Q9ULQ0 834 aa13.53□□□□□ -0.24
DNMT3A-204ENST00000380756 IFT172Q9UG01 1749 aa13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 FOXP2O15409 715 aa13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 CYTH3O43739 400 aa13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 LMNAP02545 664 aaKnown RBP13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 CRLF3Q8IUI8 442 aa13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 AENQ8WTP8 325 aaKnown RBP13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 PNMA5Q96PV4 448 aa13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 ROPN1BQ9BZX4 212 aaPredicted RBP13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 RPF1Q9H9Y2 349 aaKnown RBP13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 ROPN1Q9HAT0 212 aaPredicted RBP13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 TMBIM4Q9HC24 238 aa13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 RBAKQ9NYW8 714 aaPredicted RBP13.52□□□□□ -0.24
DNMT3A-204ENST00000380756 PI4K2BG5E9Z4 385 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 FOXN3O00409 490 aaPredicted RBP13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 MSH4O15457 936 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 KRT7P08729 469 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 CDR2Q01850 454 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 KCTD2Q14681 263 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 PPP6R3Q5H9R7 873 aaPredicted RBP13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 DNAAF3Q8N9W5 541 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 MED10Q9BTT4 135 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 RUSC1Q9BVN2 902 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 TRABDQ9H4I3 376 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 ANGPTL2Q9UKU9 493 aa13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 AGO2Q9UKV8 859 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-204ENST00000380756 AKT3Q9Y243 479 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms