RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ZFATQ9P243 1243 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 PDS5AQ29RF7 1337 aaKnown RBP18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 SUPT3HO75486 399 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 RHOBTB3O94955 611 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 ORAI2Q96SN7 254 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 OSBPL8Q9BZF1 889 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 LZTS1Q9Y250 596 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 USP17L3A6NCW0 530 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 USP17L4A6NCW7 530 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 S100A5P33763 92 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 SEC24CP53992 1094 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 DAB2P98082 770 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 MECOMQ03112 1051 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 HEATR6Q6AI08 1181 aaKnown RBP18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 USP17L1Q7RTZ2 530 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 CCNYL1Q8N7R7 359 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 SLC35G2Q8TBE7 412 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 EXT2Q93063 718 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 DBR1Q9UK59 544 aaKnown RBP18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZBTB5O15062 677 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 ANP32DO95626 131 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 UBTFL6P0CB48 400 aaPredicted RBP18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 TYK2P29597 1187 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 SCNN1DP51172 638 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 RAP1GDS1P52306 607 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 PEX3P56589 373 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 STX3Q13277 289 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 SCARA5Q6ZMJ2 495 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 TRAPPC11Q7Z392 1133 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZBTB33Q86T24 672 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 EME1Q96AY2 570 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 CCT7Q99832 543 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 C7orf25Q9BPX7 421 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 ACBD5Q5T8D3 534 aaPredicted RBP18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 RSRC2Q7L4I2 434 aaKnown RBP18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 JAMLQ86YT9 394 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 KIF2BQ8N4N8 673 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 NOA1Q8NC60 698 aaKnown RBP18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 CCSER1Q9C0I3 900 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 GTPBP10A4D1E9 387 aaKnown RBP18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 SNUPNO95149 360 aaKnown RBP18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 STK33Q9BYT3 514 aa18.07■□□□□ 0.48
COL4A3BP-203ENST00000380494 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 LRRIQ3A6PVS8 624 aaPredicted RBP18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 ABL1P00519 1130 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZNF18P17022 549 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 RHPN2Q8IUC4 686 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 TTC39CQ8N584 583 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 RBM15Q96T37 977 aaKnown RBP eCLIP18.06■□□□□ 0.489e-7■■■■□ 19.9
COL4A3BP-203ENST00000380494 PNKPQ96T60 521 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 NGRNQ9NPE2 291 aaKnown RBP18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 SLC9A2Q9UBY0 812 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 PCDHA6Q9UN73 950 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 PCDHA8Q9Y5H6 950 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 A0A1B0GW55 424 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 DUX4L2P0CJ85 424 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 DUX4L3P0CJ86 424 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 DUX4L4P0CJ87 422 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 DUX4L5P0CJ88 424 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 DUX4L6P0CJ89 424 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 DUX4L7P0CJ90 424 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 PRLRP16471 622 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 GNA15P30679 374 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 CARSP49589 748 aaKnown RBP18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 TMEM270Q6UE05 265 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 MCPH1Q8NEM0 835 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 DYNLL2Q96FJ2 89 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 MRPL1Q9BYD6 325 aaKnown RBP18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 DUX4Q9UBX2 424 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 AKT3Q9Y243 479 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 AP3B1O00203 1094 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 GYPCP04921 128 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 CAPRIN1Q14444 709 aaKnown RBP18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 TRIP10Q15642 601 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 PLD3Q8IV08 490 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 STRNO43815 780 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 TBC1D4O60343 1298 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 OR2W6PQ8NHA6 318 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 ERP44Q9BS26 406 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 MYO5CQ9NQX4 1742 aa18.06■□□□□ 0.48
COL4A3BP-203ENST00000380494 K7ERI5 159 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 CDH2P19022 906 aaPredicted RBP18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 HSD17B3P37058 310 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 AP3M2P53677 418 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 PPP6R3Q5H9R7 873 aaPredicted RBP18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 TMBIM4Q9HC24 238 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 HEG1Q9ULI3 1381 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 TCP10L2B9ZVM9 353 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 ORC4O43929 436 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 ECM2O94769 699 aaPredicted RBP18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 CENPCQ03188 943 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 PPIP5K2O43314 1243 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 PDIA5Q14554 519 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 P3H1Q32P28 736 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 MTERF2Q49AM1 385 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 ACAP3Q96P50 834 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 SFI1A8K8P3 1242 aa18.05■□□□□ 0.48
COL4A3BP-203ENST00000380494 LAMB3Q13751 1172 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms