RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ZNF408Q9H9D4 720 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 CREBZFQ9NS37 354 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 TRPM7Q96QT4 1865 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 CELF2O95319 508 aaKnown RBP24.96■■□□□ 1.59
VPS16-201ENST00000380443 MAP2K1Q02750 393 aaPredicted RBP24.96■■□□□ 1.59
VPS16-201ENST00000380443 TARBP2Q15633 366 aaKnown RBP24.96■■□□□ 1.59
VPS16-201ENST00000380443 TAS1R3Q7RTX0 852 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 DEPTORQ8TB45 409 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 GTF3C2Q8WUA4 911 aaPredicted RBP24.96■■□□□ 1.59
VPS16-201ENST00000380443 SHC3Q92529 594 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 CEP89Q96ST8 783 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 RAB20Q9NX57 234 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 TELO2Q9Y4R8 837 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 GAS2O43903 313 aaKnown RBP24.95■■□□□ 1.58
VPS16-201ENST00000380443 STAT5BP51692 787 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 SOX10P56693 466 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 TNNC1P63316 161 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 CLUL1Q15846 466 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 C8orf74Q6P047 294 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 ARMC9Q7Z3E5 817 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 CCDC127Q96BQ5 260 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 LRRC1Q9BTT6 524 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 MROH8Q9H579 483 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 STIM2Q9P246 746 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 AMFRQ9UKV5 643 aa24.95■■□□□ 1.58
VPS16-201ENST00000380443 UNCXA6NJT0 531 aa24.94■■□□□ 1.58
VPS16-201ENST00000380443 LRRN2O75325 713 aa24.94■■□□□ 1.58
VPS16-201ENST00000380443 PSMD6Q15008 389 aa24.94■■□□□ 1.58
VPS16-201ENST00000380443 USP38Q8NB14 1042 aa24.94■■□□□ 1.58
VPS16-201ENST00000380443 SLC35G2Q8TBE7 412 aa24.94■■□□□ 1.58
VPS16-201ENST00000380443 PAGR1Q9BTK6 254 aa24.94■■□□□ 1.58
VPS16-201ENST00000380443 KCNK3O14649 394 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 RTN2O75298 545 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 PSPC1Q8WXF1 523 aaKnown RBP24.93■■□□□ 1.58
VPS16-201ENST00000380443 RBM12Q9NTZ6 932 aaKnown RBP24.93■■□□□ 1.58
VPS16-201ENST00000380443 TMEM59LQ9UK28 342 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 K7ERI5 159 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 CLSTN1O94985 981 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 GLRA2P23416 452 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 GCNT1Q02742 428 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 SMYD5Q6GMV2 418 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 SV2AQ7L0J3 742 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 DAAM2Q86T65 1068 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 NT5DC3Q86UY8 548 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 PPM1KQ8N3J5 372 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 HELQQ8TDG4 1101 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 HES6Q96HZ4 224 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 MS4A14Q96JA4 679 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 AZI2Q9H6S1 392 aa24.93■■□□□ 1.58
VPS16-201ENST00000380443 RNF216Q9NWF9 866 aaPredicted RBP24.93■■□□□ 1.58
VPS16-201ENST00000380443 MAFO75444 373 aaPredicted RBP24.92■■□□□ 1.58
VPS16-201ENST00000380443 TTLL12Q14166 644 aaPredicted RBP24.92■■□□□ 1.58
VPS16-201ENST00000380443 KCTD2Q14681 263 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 TERF2Q15554 542 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 CST9Q5W186 159 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 C15orf39Q6ZRI6 1047 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 IFT20Q8IY31 132 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 RASGEF1CQ8N431 466 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 SHCBP1Q8NEM2 672 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 DHX38Q92620 1227 aaKnown RBP24.92■■□□□ 1.58
VPS16-201ENST00000380443 SEMA4DQ92854 862 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 KREMEN1Q96MU8 473 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 PCYT2Q99447 389 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 MED4Q9NPJ6 270 aa24.92■■□□□ 1.58
VPS16-201ENST00000380443 SEPT11Q9NVA2 429 aaKnown RBP24.92■■□□□ 1.58
VPS16-201ENST00000380443 TTC7AQ9ULT0 858 aaPredicted RBP24.92■■□□□ 1.58
VPS16-201ENST00000380443 A0A0U1RQG5 324 aaPredicted RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 GGPS1O95749 300 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 OAS2P29728 719 aaKnown RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 PRPF4BQ13523 1007 aaKnown RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 DLK2Q6UY11 383 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 PLPPR4Q7Z2D5 763 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 RPUSD2Q8IZ73 545 aaKnown RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 ASAP3Q8TDY4 903 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 EPS8L1Q8TE68 723 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 MORC4Q8TE76 937 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 TCP11Q8WWU5 503 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 BBXQ8WY36 941 aaPredicted RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 TMEM143Q96AN5 459 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 CLMNQ96JQ2 1002 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 FAM213AQ9BRX8 229 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 RBPJLQ9UBG7 517 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 AGO2Q9UKV8 859 aaKnown RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 SIP14410 1827 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 DNAJC25-GNG10A0A024R161 153 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 CCDC188H7C350 402 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 LGR5O75473 907 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 MATR3P43243 847 aaKnown RBP eCLIP24.91■■□□□ 1.58
VPS16-201ENST00000380443 EFNA5P52803 228 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 GPC5P78333 572 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 IER5Q5VY09 327 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 EMBQ6PCB8 327 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 C2orf69Q8N8R5 385 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 AENQ8WTP8 325 aaKnown RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.91■■□□□ 1.58
VPS16-201ENST00000380443 FNBP1Q96RU3 617 aa24.91■■□□□ 1.58
VPS16-201ENST00000380443 JPH2Q9BR39 696 aaPredicted RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.91■■□□□ 1.587e-7■■□□□ 13.6
VPS16-201ENST00000380443 NOCTQ9UK39 431 aaKnown RBP24.91■■□□□ 1.58
VPS16-201ENST00000380443 LRRC37A2A6NM11 1700 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms